Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   OIY87_RS08550 Genome accession   NZ_CP113954
Coordinates   1706618..1707427 (-) Length   269 a.a.
NCBI ID   WP_009854644.1    Uniprot ID   A0A1H7V9H2
Organism   Streptococcus gallolyticus strain XH2168     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1701618..1712427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIY87_RS08540 (OIY87_09855) smc 1701756..1705295 (-) 3540 WP_269724883.1 chromosome segregation protein SMC -
  OIY87_RS08545 (OIY87_09860) rnc 1705426..1706112 (-) 687 WP_009854642.1 ribonuclease III -
  OIY87_RS08550 (OIY87_09865) vicX 1706618..1707427 (-) 810 WP_009854644.1 MBL fold metallo-hydrolase Regulator
  OIY87_RS08555 (OIY87_09870) vicK 1707428..1708780 (-) 1353 WP_009854645.1 cell wall metabolism sensor histidine kinase VicK Regulator
  OIY87_RS08560 (OIY87_09875) vicR 1708773..1709483 (-) 711 WP_009854646.1 response regulator YycF Regulator
  OIY87_RS08565 (OIY87_09880) - 1709788..1710552 (+) 765 WP_009854647.1 amino acid ABC transporter ATP-binding protein -
  OIY87_RS08570 (OIY87_09885) - 1710563..1711375 (+) 813 WP_269724884.1 transporter substrate-binding domain-containing protein -
  OIY87_RS08575 (OIY87_09890) - 1711392..1712096 (+) 705 WP_009854649.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30298.24 Da        Isoelectric Point: 5.3852

>NTDB_id=763835 OIY87_RS08550 WP_009854644.1 1706618..1707427(-) (vicX) [Streptococcus gallolyticus strain XH2168]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDLAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGSYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGYDMKVFDTSPDEATPLTEL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=763835 OIY87_RS08550 WP_009854644.1 1706618..1707427(-) (vicX) [Streptococcus gallolyticus strain XH2168]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAAGACT
TAGATGCTATTTTTATTACACACGAACATTCTGATCATATCAAAGGGGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATTGGAAAGCTTGATTTAGCTCAAAAACATAT
TTTTGAACGTGGGAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTATCGTTTGATGAAAGATAATAAATCGTTTGTTGTCTTAACAGATACAGGTTATGTTAGTGATCGCATGGCAGGG
ATTATTGAAAATGCTGACGGTTACTTGATTGAATCGAATCATGACGTTGAGATTTTACGTTCAGGCTCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGACACTTGTCAAACGAAGATGGTGCTGGGACAATGATTCGAACGATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGGTTGGTTATGACATGAAAGTCTTTGATACCTCACCAGACGAAGCAACACCATTAAC
AGAGTTATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H7V9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766