Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   OZX66_RS05680 Genome accession   NZ_CP113926
Coordinates   1225317..1226588 (+) Length   423 a.a.
NCBI ID   WP_277124304.1    Uniprot ID   -
Organism   Ligilactobacillus acidipiscis strain ESL0726     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1220317..1231588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZX66_RS05650 (OZX66_05650) trmD 1220818..1221552 (+) 735 WP_277124294.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -
  OZX66_RS05655 (OZX66_05655) rplS 1221701..1222057 (+) 357 WP_270333194.1 50S ribosomal protein L19 -
  OZX66_RS05660 (OZX66_05660) pyrH 1222269..1222988 (+) 720 WP_270333193.1 UMP kinase -
  OZX66_RS05665 (OZX66_05665) frr 1222992..1223555 (+) 564 WP_010496191.1 ribosome recycling factor -
  OZX66_RS05670 (OZX66_05670) - 1223692..1224492 (+) 801 WP_277124298.1 isoprenyl transferase -
  OZX66_RS05675 (OZX66_05675) - 1224489..1225280 (+) 792 WP_277124301.1 phosphatidate cytidylyltransferase -
  OZX66_RS05680 (OZX66_05680) eeP 1225317..1226588 (+) 1272 WP_277124304.1 RIP metalloprotease RseP Regulator
  OZX66_RS05685 (OZX66_05685) - 1226628..1228340 (+) 1713 WP_277124308.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46266.84 Da        Isoelectric Point: 7.5107

>NTDB_id=763568 OZX66_RS05680 WP_277124304.1 1225317..1226588(+) (eeP) [Ligilactobacillus acidipiscis strain ESL0726]
MFITIIAFIIVFGIIVTSHEFGHFIVAKKSGILVREFSIGMGPKLFATHKNGTTYTIRILPLGGYVRMAGLEDDEDTLQK
GMPVNLILDQDEEVEKINTSHKVSLLNGLPIEVTEWDLIDDLYIEGYENGDEEKLRRFNVKPNAMIIETDGTEVQIAPRN
VQYQSASLIRRILTNIAGPVNNFLLAILAFILIAGIQGGSVTAINTVGAVQENSVAQKAGLKKGDKIVAVEGKKTASWDS
LSTAIGSRAGKKTELTINRDNKKQQVTLTPKSQNSGGQKVGMIGIQAGQKVDHSFGGIITYGFTQTYSVMKAVWDALVNM
FHGFSLNDLGGPVAMYSFTQQATKYGLISVINLLAFLSINLGIVNLLPIPALDGGKLLLNIIEAIRGKPLDPSKETLITL
IGFGFMMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=763568 OZX66_RS05680 WP_277124304.1 1225317..1226588(+) (eeP) [Ligilactobacillus acidipiscis strain ESL0726]
ATGTTCATTACGATCATCGCTTTTATAATTGTTTTTGGGATCATTGTGACTTCCCATGAATTTGGACATTTTATAGTTGC
AAAAAAATCTGGTATTTTAGTCCGTGAATTTTCTATTGGCATGGGTCCCAAGTTATTTGCTACTCATAAAAATGGAACGA
CCTATACGATCAGGATCTTGCCTTTGGGTGGTTATGTCCGCATGGCCGGTCTAGAAGATGATGAGGATACCTTGCAAAAA
GGGATGCCTGTTAATTTGATCTTAGATCAAGATGAAGAGGTTGAAAAAATTAATACTAGCCATAAAGTCAGTTTATTGAA
CGGTTTGCCGATTGAAGTGACTGAATGGGACCTGATCGATGATTTATATATCGAAGGATACGAAAATGGTGATGAAGAGA
AGCTGCGTCGCTTCAATGTTAAGCCTAATGCTATGATCATTGAAACAGATGGCACGGAAGTACAAATTGCTCCACGTAAT
GTTCAGTATCAATCAGCAAGTTTGATCAGGAGGATCCTAACAAATATTGCTGGTCCGGTGAATAACTTTCTTTTAGCGAT
TTTGGCCTTTATTTTGATTGCTGGCATTCAAGGTGGTTCTGTGACAGCGATCAATACAGTTGGGGCTGTGCAAGAAAACT
CTGTGGCTCAAAAAGCAGGCCTAAAAAAGGGTGATAAGATCGTTGCCGTTGAAGGTAAAAAAACGGCTTCTTGGGATTCT
TTGTCTACTGCTATTGGAAGTAGAGCAGGTAAGAAAACAGAATTGACCATAAATCGTGATAATAAGAAACAGCAAGTTAC
TTTGACGCCTAAATCACAAAATTCTGGTGGTCAAAAAGTAGGAATGATCGGGATCCAAGCCGGTCAAAAAGTTGATCATT
CATTCGGGGGAATCATTACTTACGGTTTCACGCAGACATACTCTGTGATGAAAGCCGTTTGGGATGCGCTGGTCAATATG
TTCCACGGTTTTAGTCTGAATGATTTGGGTGGGCCAGTCGCAATGTACTCGTTCACTCAACAAGCAACTAAATATGGGCT
TATCAGTGTTATCAATCTGCTGGCCTTTTTATCGATCAATTTAGGGATCGTAAATTTATTGCCGATCCCAGCGTTAGATG
GTGGTAAACTATTACTGAATATTATTGAAGCAATTCGCGGTAAACCACTTGATCCAAGTAAAGAAACCTTGATCACATTG
ATTGGTTTTGGGTTTATGATGCTTTTAATGATATTAGTCACTTGGAATGATATTCAACGATATTTTTTCTAG

Domains


Predicted by InterproScan.

(207-259)

(7-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.664

100

0.482

  eeP Streptococcus thermophilus LMD-9

47.664

100

0.482