Detailed information
Bioinformatically predicted
Overview
| Name | comL | Type | Machinery gene |
| Locus tag | M2Z51_RS10785 | Genome accession | NZ_AP024967 |
| Coordinates | 2391458..2392183 (+) | Length | 241 a.a. |
| NCBI ID | WP_000877198.1 | Uniprot ID | Q9KU21 |
| Organism | Vibrio cholerae strain V130003 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2386458..2397183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2Z51_RS10770 | clpB | 2386907..2389479 (-) | 2573 | Protein_2090 | ATP-dependent chaperone ClpB | - |
| M2Z51_RS10775 (V130003_21490) | pgeF | 2389604..2390326 (-) | 723 | WP_001963985.1 | peptidoglycan editing factor PgeF | - |
| M2Z51_RS10780 (V130003_21500) | rluD | 2390329..2391303 (-) | 975 | WP_000941105.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| M2Z51_RS10785 (V130003_21510) | comL | 2391458..2392183 (+) | 726 | WP_000877198.1 | outer membrane protein assembly factor BamD | Machinery gene |
| M2Z51_RS10790 (V130003_21520) | raiA | 2392597..2392923 (+) | 327 | WP_000700179.1 | ribosome-associated translation inhibitor RaiA | - |
| M2Z51_RS10795 (V130003_21530) | pheA | 2393162..2394337 (+) | 1176 | WP_000130286.1 | prephenate dehydratase | - |
| M2Z51_RS10800 (V130003_21540) | - | 2394519..2395553 (+) | 1035 | WP_032476883.1 | PotD/PotF family extracellular solute-binding protein | - |
Sequence
Protein
Download Length: 241 a.a. Molecular weight: 27875.68 Da Isoelectric Point: 5.1660
>NTDB_id=76342 M2Z51_RS10785 WP_000877198.1 2391458..2392183(+) (comL) [Vibrio cholerae strain V130003]
MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKN
DDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAED
AQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLNP
L
MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKN
DDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAED
AQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLNP
L
Nucleotide
Download Length: 726 bp
>NTDB_id=76342 M2Z51_RS10785 WP_000877198.1 2391458..2392183(+) (comL) [Vibrio cholerae strain V130003]
ATGAAATACCAGACTTTATCAGGCCTACTCGCGTTATCCCTGTTATTTGGTTGCTCTAGCAGCCCAGATGTGGTGCCAGA
TGTACCGCCATCACAGCTGTACTCTGAAGCGCAAACCGCTCTACAAAGCGGAACGTGGTTAACCGCTATAGAAAAACTCG
AAGCGCTCGATTCACGCTATCCATTTGGTGCTTATTCAGAGCAAGTACAGCTCGATCTGATTTATGCCTACTACAAAAAT
GATGATCTGGCCCTTGGCCTCGCGACCATCGAACGTTTTACACGCCTTAATCCAACCCATGAAAAAATGGATTGGGTACT
CTACATGCGCGGTTTGACGCACATGGCGCAAGATCGCAACTTCATGCATGACCTGTTTAATATCGATCGCCGTGACCGCG
ATCCTGAACCCGTGAAAGCAGCCTTTGCGGATTTTAAGAAACTGCTCCAGCGTTACCCAAACAGCCCATACGCAGAAGAT
GCGCAGCGTCGAATGTTTGCACTCAAGAACCGTTTAGCGGAATACGATTTAGCGACCGCAGATTTCTACCTGCGCCGTGA
AGCATGGATTGCAGCGATTAATCGCACTCAAGAGTTACAAAAAACCTATCCAGATACCGAAGCGGCACGTAAATCCTTAG
AAATCCAACTCGAGGCTTATCAGCAGCTTGGTTTAACCGACGCGATAGAGCGAACTAAGCAGTTAATGCAGCTTAATCCT
TTATAA
ATGAAATACCAGACTTTATCAGGCCTACTCGCGTTATCCCTGTTATTTGGTTGCTCTAGCAGCCCAGATGTGGTGCCAGA
TGTACCGCCATCACAGCTGTACTCTGAAGCGCAAACCGCTCTACAAAGCGGAACGTGGTTAACCGCTATAGAAAAACTCG
AAGCGCTCGATTCACGCTATCCATTTGGTGCTTATTCAGAGCAAGTACAGCTCGATCTGATTTATGCCTACTACAAAAAT
GATGATCTGGCCCTTGGCCTCGCGACCATCGAACGTTTTACACGCCTTAATCCAACCCATGAAAAAATGGATTGGGTACT
CTACATGCGCGGTTTGACGCACATGGCGCAAGATCGCAACTTCATGCATGACCTGTTTAATATCGATCGCCGTGACCGCG
ATCCTGAACCCGTGAAAGCAGCCTTTGCGGATTTTAAGAAACTGCTCCAGCGTTACCCAAACAGCCCATACGCAGAAGAT
GCGCAGCGTCGAATGTTTGCACTCAAGAACCGTTTAGCGGAATACGATTTAGCGACCGCAGATTTCTACCTGCGCCGTGA
AGCATGGATTGCAGCGATTAATCGCACTCAAGAGTTACAAAAAACCTATCCAGATACCGAAGCGGCACGTAAATCCTTAG
AAATCCAACTCGAGGCTTATCAGCAGCTTGGTTTAACCGACGCGATAGAGCGAACTAAGCAGTTAATGCAGCTTAATCCT
TTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL | Neisseria meningitidis MC58 |
38.589 |
100 |
0.386 |
| comL | Neisseria gonorrhoeae MS11 |
37.759 |
100 |
0.378 |