Detailed information NTG0076293

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M2Z51_RS01215
• Genome accession: NZ_AP024967
• Coordinates: 265786..266793 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: Q9KNQ4
• Organism: Vibrio cholerae strain V130003
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 260786..271793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2Z51_RS01195 (V130003_02290)	metJ	260791..261108 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
M2Z51_RS01200 (V130003_02300)	-	261218..262495 (-)	1278	WP_032477253.1	malic enzyme-like NAD(P)-binding protein	-
M2Z51_RS01205 (V130003_02310)	rpmE	262803..263021 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
M2Z51_RS01210 (V130003_02320)	priA	263276..265480 (+)	2205	WP_001247903.1	primosomal protein N'	Machinery gene
M2Z51_RS01215 (V130003_02330)	cytR	265786..266793 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
M2Z51_RS01220 (V130003_02340)	-	266965..267516 (+)	552	WP_001891621.1	SPOR domain-containing protein	-
M2Z51_RS01225 (V130003_02350)	hslV	267652..268209 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
M2Z51_RS01230 (V130003_02360)	hslU	268275..269606 (+)	1332	WP_001293366.1	HslU--HslV peptidase ATPase subunit	-
M2Z51_RS01235 (V130003_02370)	-	269710..270627 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M2Z51_RS01240 (V130003_02380)	rraA	270702..271217 (+)	516	WP_000456242.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=76293 M2Z51_RS01215 WP_000224452.1 265786..266793(+) (cytR) [Vibrio cholerae strain V130003]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=76293 M2Z51_RS01215 WP_000224452.1 265786..266793(+) (cytR) [Vibrio cholerae strain V130003]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGCAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCTGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTCGAATTATTGCGCGGACACGATGTGCGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: Q9KNQ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904