Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OXV11_RS14625 Genome accession   NZ_CP113535
Coordinates   2947920..2948525 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain ZLQ     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2942920..2953525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXV11_RS14610 helD 2943137..2945191 (-) 2055 WP_000420505.1 DNA helicase IV -
  OXV11_RS14615 - 2945315..2945761 (+) 447 WP_001261222.1 YccF domain-containing protein -
  OXV11_RS14620 yccS 2945780..2947933 (+) 2154 WP_000950880.1 YccS family putative transporter -
  OXV11_RS14625 sxy/tfoX 2947920..2948525 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  OXV11_RS14630 sulA 2948742..2949251 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  OXV11_RS14635 ompA 2949608..2950660 (+) 1053 WP_001674965.1 porin OmpA -
  OXV11_RS14640 matP 2950732..2951184 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  OXV11_RS14645 - 2951370..2953130 (+) 1761 WP_000156454.1 AAA family ATPase -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=762870 OXV11_RS14625 WP_001202375.1 2947920..2948525(-) (sxy/tfoX) [Salmonella enterica strain ZLQ]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=762870 OXV11_RS14625 WP_001202375.1 2947920..2948525(-) (sxy/tfoX) [Salmonella enterica strain ZLQ]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751