Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OU800_RS22560 Genome accession   NZ_CP113519
Coordinates   5069756..5070163 (-) Length   135 a.a.
NCBI ID   WP_268179621.1    Uniprot ID   -
Organism   Pseudomonas sp. GOM7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5064756..5075163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OU800_RS22540 (OU800_22540) - 5065651..5066511 (-) 861 WP_268184410.1 protein-glutamate O-methyltransferase -
  OU800_RS22545 (OU800_22545) - 5066578..5068614 (-) 2037 WP_268179615.1 methyl-accepting chemotaxis protein -
  OU800_RS22550 (OU800_22550) - 5068699..5069235 (-) 537 WP_268179617.1 chemotaxis protein CheW -
  OU800_RS22555 (OU800_22555) pilH 5069344..5069709 (-) 366 WP_268179619.1 twitching motility response regulator PilH -
  OU800_RS22560 (OU800_22560) pilG 5069756..5070163 (-) 408 WP_268179621.1 twitching motility response regulator PilG Regulator
  OU800_RS22565 (OU800_22565) gshB 5070409..5071365 (+) 957 WP_268179623.1 glutathione synthase -
  OU800_RS22570 (OU800_22570) - 5071452..5072348 (+) 897 WP_268179625.1 energy transducer TonB -
  OU800_RS22575 (OU800_22575) - 5072466..5073035 (+) 570 WP_268179626.1 YqgE/AlgH family protein -
  OU800_RS22580 (OU800_22580) ruvX 5073032..5073469 (+) 438 WP_268184412.1 Holliday junction resolvase RuvX -
  OU800_RS22585 (OU800_22585) pyrR 5073496..5074002 (+) 507 WP_268179627.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OU800_RS22590 (OU800_22590) - 5074014..5075021 (+) 1008 WP_268179629.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14817.22 Da        Isoelectric Point: 6.7047

>NTDB_id=762694 OU800_RS22560 WP_268179621.1 5069756..5070163(-) (pilG) [Pseudomonas sp. GOM7]
MEQHCDGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=762694 OU800_RS22560 WP_268179621.1 5069756..5070163(-) (pilG) [Pseudomonas sp. GOM7]
ATGGAACAGCATTGCGACGGCTTGAAAGTGATGGTGATCGACGACTCGAAGACGATTCGTCGCACTGCGGAAACCTTGCT
GAAGAAGGTGGGCTGCGAAGTCATCACTGCGGTCGACGGCTTCGATGCCTTGGCCAAGATCGCCGACACCCATCCAAGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGATGGTTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCTTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGATGGTCTGTTCGACAAGGCCAAAGGACGCATCGTGGGTTCCGATCAGTA
TCTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGTGCCATCAAGACTCATGTGCCGGACTTCACTCCGGTAGAACAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

92.593

0.711
  vicR Streptococcus mutans UA159

41.27

93.333

0.385