Detailed information NTG0762448

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: OPT60_RS10405
• Genome accession: NZ_CP125359
• Coordinates: 2124632..2125738 (+)
• Length: 368 a.a.
• NCBI ID: WP_084916590.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain UT_10236
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2119632..2130738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OPT60_RS10380 (OPT60_10380)	pgsA	2119742..2120284 (-)	543	WP_003062173.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
OPT60_RS10385 (OPT60_10385)	-	2120298..2121329 (-)	1032	WP_003061371.1	helix-turn-helix domain-containing protein	-
OPT60_RS10390 (OPT60_10390)	-	2121379..2122662 (-)	1284	WP_084916595.1	pitrilysin family protein	-
OPT60_RS10395 (OPT60_10395)	-	2122664..2123908 (-)	1245	WP_084916593.1	pitrilysin family protein	-
OPT60_RS10400 (OPT60_10400)	yaaA	2124217..2124630 (+)	414	WP_084916592.1	S4 domain-containing protein YaaA	-
OPT60_RS10405 (OPT60_10405)	recF	2124632..2125738 (+)	1107	WP_084916590.1	DNA replication/repair protein RecF	Machinery gene
OPT60_RS10410 (OPT60_10410)	-	2125795..2126658 (-)	864	WP_003055126.1	GRP family sugar transporter	-
OPT60_RS10415 (OPT60_10415)	guaB	2126870..2128351 (-)	1482	WP_003060436.1	IMP dehydrogenase	-
OPT60_RS10420 (OPT60_10420)	trpS	2128568..2129590 (-)	1023	WP_003055141.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41901.79 Da
• Isoelectric Point: 7.8105

>NTDB_id=762448 OPT60_RS10405 WP_084916590.1 2124632..2125738(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRVSGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKRTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFQVTKGTIQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=762448 OPT60_RS10405 WP_084916590.1 2124632..2125738(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCATCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTGTTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGCGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGGGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAACCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAATTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCATTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAGAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTGGGCCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGAATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCAAGTGACAAAAGGAACCATTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462