Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   QL281_RS06940 Genome accession   NZ_CP125292
Coordinates   1259298..1260161 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain SRCM117797     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1254298..1265161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS06905 (QL281_06905) mrpE 1254466..1254942 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QL281_RS06910 (QL281_06910) mrpF 1254942..1255226 (+) 285 WP_041052851.1 Na(+)/H(+) antiporter subunit F1 -
  QL281_RS06915 (QL281_06915) mnhG 1255210..1255584 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QL281_RS06920 (QL281_06920) yuxO 1255623..1256003 (-) 381 WP_041052848.1 hotdog fold thioesterase -
  QL281_RS06925 (QL281_06925) comA 1256022..1256666 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QL281_RS06930 (QL281_06930) comP 1256747..1259059 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  QL281_RS06935 (QL281_06935) comX 1259075..1259296 (-) 222 WP_014480704.1 competence pheromone ComX -
  QL281_RS06940 (QL281_06940) comQ 1259298..1260161 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  QL281_RS06945 (QL281_06945) degQ 1260346..1260486 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QL281_RS06950 (QL281_06950) - 1260708..1260833 (+) 126 WP_003228793.1 hypothetical protein -
  QL281_RS06955 (QL281_06955) - 1260947..1261315 (+) 369 WP_014477834.1 hypothetical protein -
  QL281_RS06960 (QL281_06960) pdeH 1261291..1262520 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  QL281_RS06965 (QL281_06965) pncB 1262657..1264129 (-) 1473 WP_041352162.1 nicotinate phosphoribosyltransferase -
  QL281_RS06970 (QL281_06970) pncA 1264145..1264696 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=762243 QL281_RS06940 WP_014480705.1 1259298..1260161(-) (comQ) [Bacillus subtilis strain SRCM117797]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=762243 QL281_RS06940 WP_014480705.1 1259298..1260161(-) (comQ) [Bacillus subtilis strain SRCM117797]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439