Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   OXA86_RS06630 Genome accession   NZ_CP113439
Coordinates   1463106..1463447 (+) Length   113 a.a.
NCBI ID   WP_014841550.1    Uniprot ID   A0AAV2UWU9
Organism   Legionella pneumophila strain PATHC002     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1458106..1468447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXA86_RS06605 (OXA86_06605) acpP 1458934..1459182 (+) 249 WP_003631752.1 acyl carrier protein -
  OXA86_RS06610 (OXA86_06610) fabF 1459202..1460440 (+) 1239 WP_014841546.1 beta-ketoacyl-ACP synthase II -
  OXA86_RS06615 (OXA86_06615) mltG 1460441..1461439 (+) 999 WP_014841547.1 endolytic transglycosylase MltG -
  OXA86_RS06620 (OXA86_06620) tmk 1461439..1462077 (+) 639 WP_014841548.1 dTMP kinase -
  OXA86_RS06625 (OXA86_06625) - 1462074..1462979 (+) 906 WP_044497488.1 DNA polymerase III subunit delta' -
  OXA86_RS06630 (OXA86_06630) pilZ 1463106..1463447 (+) 342 WP_014841550.1 PilZ domain-containing protein Machinery gene
  OXA86_RS06635 (OXA86_06635) - 1463503..1464291 (+) 789 WP_014841551.1 TatD family hydrolase -
  OXA86_RS06640 (OXA86_06640) - 1464403..1465503 (+) 1101 WP_014841552.1 anhydro-N-acetylmuramic acid kinase -
  OXA86_RS06645 (OXA86_06645) - 1465559..1466851 (+) 1293 WP_014841553.1 MFS transporter -
  OXA86_RS06650 (OXA86_06650) - 1466927..1468207 (-) 1281 WP_014841554.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12533.60 Da        Isoelectric Point: 8.2421

>NTDB_id=762234 OXA86_RS06630 WP_014841550.1 1463106..1463447(+) (pilZ) [Legionella pneumophila strain PATHC002]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFIGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=762234 OXA86_RS06630 WP_014841550.1 1463106..1463447(+) (pilZ) [Legionella pneumophila strain PATHC002]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTATCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991