Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OUY36_RS20425 Genome accession   NZ_CP113258
Coordinates   4345590..4345997 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas sp. R40042     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4340590..4350997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OUY36_RS20405 (OUY36_20405) - 4341550..4342416 (-) 867 WP_156244993.1 CheR family methyltransferase -
  OUY36_RS20410 (OUY36_20410) - 4342478..4344526 (-) 2049 WP_102838894.1 methyl-accepting chemotaxis protein -
  OUY36_RS20415 (OUY36_20415) - 4344603..4345139 (-) 537 WP_110778835.1 chemotaxis protein CheW -
  OUY36_RS20420 (OUY36_20420) pilH 4345181..4345546 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  OUY36_RS20425 (OUY36_20425) pilG 4345590..4345997 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  OUY36_RS20430 (OUY36_20430) gshB 4346233..4347183 (+) 951 WP_017245425.1 glutathione synthase -
  OUY36_RS20435 (OUY36_20435) - 4347271..4348164 (+) 894 WP_017245426.1 energy transducer TonB -
  OUY36_RS20440 (OUY36_20440) - 4348309..4348878 (+) 570 WP_152481924.1 YqgE/AlgH family protein -
  OUY36_RS20445 (OUY36_20445) ruvX 4348875..4349303 (+) 429 WP_253749294.1 Holliday junction resolvase RuvX -
  OUY36_RS20450 (OUY36_20450) pyrR 4349325..4349840 (+) 516 WP_267935790.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OUY36_RS20455 (OUY36_20455) - 4349899..4350915 (+) 1017 WP_017245430.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=761354 OUY36_RS20425 WP_003282729.1 4345590..4345997(-) (pilG) [Stutzerimonas sp. R40042]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=761354 OUY36_RS20425 WP_003282729.1 4345590..4345997(-) (pilG) [Stutzerimonas sp. R40042]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGGTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4