Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OSV15_RS22090 Genome accession   NZ_CP113257
Coordinates   4600063..4600470 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain TF18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4595063..4605470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV15_RS22070 (OSV15_22070) - 4596023..4596889 (-) 867 WP_125867219.1 CheR family methyltransferase -
  OSV15_RS22075 (OSV15_22075) - 4596951..4598999 (-) 2049 WP_063540694.1 methyl-accepting chemotaxis protein -
  OSV15_RS22080 (OSV15_22080) - 4599076..4599612 (-) 537 WP_110778835.1 chemotaxis protein CheW -
  OSV15_RS22085 (OSV15_22085) pilH 4599654..4600019 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  OSV15_RS22090 (OSV15_22090) pilG 4600063..4600470 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  OSV15_RS22095 (OSV15_22095) gshB 4600706..4601656 (+) 951 WP_267931426.1 glutathione synthase -
  OSV15_RS22100 (OSV15_22100) - 4601744..4602637 (+) 894 WP_017245426.1 energy transducer TonB -
  OSV15_RS22105 (OSV15_22105) - 4602782..4603351 (+) 570 WP_125852423.1 YqgE/AlgH family protein -
  OSV15_RS22110 (OSV15_22110) ruvX 4603348..4603776 (+) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  OSV15_RS22115 (OSV15_22115) pyrR 4603798..4604313 (+) 516 WP_110778831.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OSV15_RS22120 (OSV15_22120) - 4604372..4605388 (+) 1017 WP_267931427.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=761323 OSV15_RS22090 WP_003282729.1 4600063..4600470(-) (pilG) [Stutzerimonas frequens strain TF18]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=761323 OSV15_RS22090 WP_003282729.1 4600063..4600470(-) (pilG) [Stutzerimonas frequens strain TF18]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGCTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGGTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4