Detailed information NTG0761317

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OSV15_RS15175
• Genome accession: NZ_CP113257
• Coordinates: 3142820..3145045 (-)
• Length: 741 a.a.
• NCBI ID: WP_267930698.1
• Uniprot ID: A0AA47DYS2
• Organism: Stutzerimonas frequens strain TF18
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3137820..3150045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV15_RS15140 (OSV15_15140)	murB	3138210..3139229 (-)	1020	WP_208216300.1	UDP-N-acetylmuramate dehydrogenase	-
OSV15_RS15145 (OSV15_15145)	-	3139226..3139693 (-)	468	WP_267930696.1	low molecular weight protein-tyrosine-phosphatase	-
OSV15_RS15150 (OSV15_15150)	kdsB	3139695..3140459 (-)	765	WP_267930697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OSV15_RS15155 (OSV15_15155)	-	3140456..3140641 (-)	186	WP_011913743.1	Trm112 family protein	-
OSV15_RS15160 (OSV15_15160)	lpxK	3140687..3141691 (-)	1005	WP_208216302.1	tetraacyldisaccharide 4'-kinase	-
OSV15_RS15165 (OSV15_15165)	-	3141691..3142119 (-)	429	WP_063539898.1	ExbD/TolR family protein	-
OSV15_RS15170 (OSV15_15170)	-	3142116..3142748 (-)	633	WP_063539899.1	MotA/TolQ/ExbB proton channel family protein	-
OSV15_RS15175 (OSV15_15175)	comA	3142820..3145045 (-)	2226	WP_267930698.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OSV15_RS15180 (OSV15_15180)	-	3145192..3145707 (+)	516	WP_063539900.1	DUF2062 domain-containing protein	-
OSV15_RS15185 (OSV15_15185)	-	3145720..3146964 (-)	1245	WP_267932896.1	lipoprotein-releasing ABC transporter permease subunit	-
OSV15_RS15190 (OSV15_15190)	lolD	3146964..3147653 (-)	690	WP_063539901.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OSV15_RS15195 (OSV15_15195)	-	3147661..3148908 (-)	1248	WP_102840158.1	lipoprotein-releasing ABC transporter permease subunit	-
OSV15_RS15200 (OSV15_15200)	-	3148942..3149577 (+)	636	WP_267930699.1	PilZ domain-containing protein	-
OSV15_RS15205 (OSV15_15205)	-	3149581..3149889 (+)	309	WP_230726389.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80800.23 Da
• Isoelectric Point: 9.1966

>NTDB_id=761317 OSV15_RS15175 WP_267930698.1 3142820..3145045(-) (comA) [Stutzerimonas frequens strain TF18]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAAGLLLLLRVRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSTVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHSFDYEAWLLARRIGAT
GTIKAGERLTASRASDGWRDRLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAALL
YGLVALLARLGVWPRWLPWLPLACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWKALTRAQWAATLGLLPLLLALGLPISASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGVGVLLLLLPAGIPLRSLGLLLLLP
LVFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GAEAVQRLLRVERVVSGEPSRHAPDLGAERCESGSSWQWNDVHFSVWQWQAAQDSNQQSCVLQIEANGERILLTGDIDQP
AEQAWLASEQQMSSHWLLLPHHGSRSSSSEPFLHGVAAQAALISRSLHNPFGHPHPSVTARLEAFDIKAYDTALHGAIRI
DLGGFSPPELQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=761317 OSV15_RS15175 WP_267930698.1 3142820..3145045(-) (comA) [Stutzerimonas frequens strain TF18]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGCCTGGTCCTGCCACGCTTTCTTCCAGCTTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCTGCTGCCGGACTGTTGCTGCTGCTGCGCGTCCGCTGGGTGGCGCCAGGCCTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGGTTGCCAGCGTCCATGGACGGTCGCACGTTCTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGACGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGGCTGGCGGCGCGAC
TGAAACGGCCACATGGCATGGTCAACCCGCATTCCTTCGACTACGAAGCCTGGTTGCTGGCGCGACGTATCGGCGCCACC
GGCACGATCAAGGCGGGTGAGCGCCTGACGGCGTCGAGGGCAAGCGACGGATGGCGCGATCGGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGCTGCAGGATACCGGCACCGTCCACCTGATGGTCATCTCCGGGCAGCACATCGGCATGTTGGCGGCGCTGCTC
TATGGTCTGGTCGCGTTGCTGGCTCGCCTGGGCGTGTGGCCGCGGTGGTTGCCCTGGCTGCCCTTGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGAGGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGGTTGCGCTTTCGCCATCTGGGCGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCCCTGGTCACACTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGAAGGCCCTGACTCGGGCGCAGTGGGCGGCGACCCTCGGCCTGCTTCCGCTGTTGCTCG
CCCTGGGGCTGCCGATAAGCGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTCACCGTGCCCTTC
GCGTTGCTTGGTACGCTGCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCAGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCTT
TAATCGGGGTGGGCGTCCTGTTGCTGTTGCTGCCAGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGGTTTTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGAGGCGGTCCAGCGGCTGCTCCGGGTCGAGCGGGTGGTCAGTGGCGAGCCGTCTCGCCACGCGCCGGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCACTTCAGTGTGTGGCAATGGCAGGCGGCGCAGG
ACAGCAACCAGCAGTCCTGCGTGCTGCAGATCGAGGCCAACGGTGAGCGAATCCTGCTCACCGGTGACATCGACCAGCCC
GCCGAGCAGGCTTGGCTGGCAAGTGAGCAGCAGATGTCATCGCACTGGCTGCTGCTGCCCCATCACGGCAGCCGCAGCTC
CTCGTCGGAGCCGTTTCTGCATGGCGTGGCCGCGCAAGCCGCGCTGATCTCGCGAAGTCTGCACAATCCGTTCGGCCACC
CGCACCCGAGCGTGACCGCGCGGCTCGAGGCGTTCGATATCAAGGCCTACGACACCGCGTTGCATGGCGCCATCCGGATC
GATCTGGGCGGTTTTTCGCCGCCGGAGCTGCAACGCTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-653)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.106	96.356	0.637
comA	Ralstonia pseudosolanacearum GMI1000	36.375	100	0.382