Detailed information NTG0761240

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ORP33_RS06035
• Genome accession: NZ_CP113256
• Coordinates: 1172119..1173072 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain K1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1167119..1178072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORP33_RS06010 (ORP33_05915)	argF	1168952..1169911 (+)	960	WP_014476421.1	ornithine carbamoyltransferase	-
ORP33_RS06015 (ORP33_05920)	yjzC	1169997..1170176 (+)	180	WP_003245356.1	YjzC family protein	-
ORP33_RS06020 (ORP33_05925)	yjzD	1170222..1170407 (-)	186	WP_003245236.1	YjzD family protein	-
ORP33_RS06025 (ORP33_05930)	-	1170656..1171390 (+)	735	WP_033883595.1	hypothetical protein	-
ORP33_RS06030 (ORP33_05935)	-	1171472..1172029 (+)	558	WP_014479435.1	hypothetical protein	-
ORP33_RS06035 (ORP33_05940)	med	1172119..1173072 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ORP33_RS06040 (ORP33_05945)	comZ	1173087..1173278 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ORP33_RS06045 (ORP33_05950)	yjzB	1173308..1173547 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ORP33_RS06050 (ORP33_05955)	fabH	1173712..1174650 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ORP33_RS06055 (ORP33_05960)	fabF	1174673..1175914 (+)	1242	WP_225721953.1	beta-ketoacyl-ACP synthase II	-
ORP33_RS06060 (ORP33_05965)	yjaZ	1175990..1176775 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
ORP33_RS06065 (ORP33_05970)	appD	1176967..1177953 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=761240 ORP33_RS06035 WP_014476425.1 1172119..1173072(+) (med) [Bacillus subtilis strain K1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=761240 ORP33_RS06035 WP_014476425.1 1172119..1173072(+) (med) [Bacillus subtilis strain K1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCCGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997