Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ORP33_RS06040 Genome accession   NZ_CP113256
Coordinates   1173087..1173278 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain K1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1168087..1178278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS06010 (ORP33_05915) argF 1168952..1169911 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  ORP33_RS06015 (ORP33_05920) yjzC 1169997..1170176 (+) 180 WP_003245356.1 YjzC family protein -
  ORP33_RS06020 (ORP33_05925) yjzD 1170222..1170407 (-) 186 WP_003245236.1 YjzD family protein -
  ORP33_RS06025 (ORP33_05930) - 1170656..1171390 (+) 735 WP_033883595.1 hypothetical protein -
  ORP33_RS06030 (ORP33_05935) - 1171472..1172029 (+) 558 WP_014479435.1 hypothetical protein -
  ORP33_RS06035 (ORP33_05940) med 1172119..1173072 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ORP33_RS06040 (ORP33_05945) comZ 1173087..1173278 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ORP33_RS06045 (ORP33_05950) yjzB 1173308..1173547 (-) 240 WP_003232972.1 spore coat protein YjzB -
  ORP33_RS06050 (ORP33_05955) fabH 1173712..1174650 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ORP33_RS06055 (ORP33_05960) fabF 1174673..1175914 (+) 1242 WP_225721953.1 beta-ketoacyl-ACP synthase II -
  ORP33_RS06060 (ORP33_05965) yjaZ 1175990..1176775 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  ORP33_RS06065 (ORP33_05970) appD 1176967..1177953 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=761241 ORP33_RS06040 WP_003224559.1 1173087..1173278(+) (comZ) [Bacillus subtilis strain K1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=761241 ORP33_RS06040 WP_003224559.1 1173087..1173278(+) (comZ) [Bacillus subtilis strain K1]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1