Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | OTU47_RS04515 | Genome accession | NZ_CP113115 |
| Coordinates | 841100..841495 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain NP2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 836100..846495
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTU47_RS04465 (OTU47_04465) | - | 836235..836597 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| OTU47_RS04470 (OTU47_04470) | - | 836594..837097 (+) | 504 | WP_000800945.1 | phosphatase PAP2 family protein | - |
| OTU47_RS04475 (OTU47_04475) | - | 837211..837657 (+) | 447 | WP_000776596.1 | LytTR family DNA-binding domain-containing protein | - |
| OTU47_RS04480 (OTU47_04480) | - | 837662..838336 (+) | 675 | WP_000725719.1 | LiaF transmembrane domain-containing protein | - |
| OTU47_RS04485 (OTU47_04485) | - | 838497..838688 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| OTU47_RS04490 (OTU47_04490) | - | 838695..838775 (+) | 81 | WP_223200442.1 | hypothetical protein | - |
| OTU47_RS04495 (OTU47_04495) | - | 838973..839272 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| OTU47_RS04500 (OTU47_04500) | - | 839269..839586 (+) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| OTU47_RS04505 (OTU47_04505) | ytpR | 839602..840228 (+) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| OTU47_RS04510 (OTU47_04510) | - | 840261..841022 (+) | 762 | WP_001107743.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| OTU47_RS04515 (OTU47_04515) | ssbB/cilA | 841100..841495 (+) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| OTU47_RS04520 (OTU47_04520) | groES | 841765..842049 (+) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| OTU47_RS04525 (OTU47_04525) | groL | 842065..843687 (+) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| OTU47_RS04530 (OTU47_04530) | - | 843825..844580 (+) | 756 | Protein_862 | epoxyqueuosine reductase QueH | - |
| OTU47_RS04535 (OTU47_04535) | - | 845026..845799 (+) | 774 | WP_000566048.1 | class I SAM-dependent methyltransferase | - |
| OTU47_RS04540 (OTU47_04540) | - | 845812..846150 (+) | 339 | WP_001809290.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=760427 OTU47_RS04515 WP_000282467.1 841100..841495(+) (ssbB/cilA) [Streptococcus pneumoniae strain NP2]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=760427 OTU47_RS04515 WP_000282467.1 841100..841495(+) (ssbB/cilA) [Streptococcus pneumoniae strain NP2]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |