Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | OVY33_RS10945 | Genome accession | NZ_CP113107 |
| Coordinates | 2244070..2244948 (+) | Length | 292 a.a. |
| NCBI ID | WP_103358244.1 | Uniprot ID | A0A2K3YNX8 |
| Organism | Staphylococcus rostri strain PJFA-333 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2210357..2300465 | 2244070..2244948 | within | 0 |
Gene organization within MGE regions
Location: 2210357..2300465
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OVY33_RS10790 | fabG | 2210492..2211229 (+) | 738 | WP_303350532.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| OVY33_RS10795 | - | 2211415..2211648 (+) | 234 | WP_044361001.1 | acyl carrier protein | - |
| OVY33_RS10800 | rnc | 2211946..2212677 (+) | 732 | WP_103357333.1 | ribonuclease III | - |
| OVY33_RS10805 | smc | 2212681..2216250 (+) | 3570 | WP_103357334.1 | chromosome segregation protein SMC | - |
| OVY33_RS10810 | ftsY | 2216252..2217460 (+) | 1209 | WP_103357335.1 | signal recognition particle-docking protein FtsY | - |
| OVY33_RS10815 | - | 2217447..2217779 (+) | 333 | WP_103357336.1 | putative DNA-binding protein | - |
| OVY33_RS10820 | ffh | 2217793..2219160 (+) | 1368 | WP_103357337.1 | signal recognition particle protein | - |
| OVY33_RS10825 | rpsP | 2219291..2219566 (+) | 276 | WP_044360994.1 | 30S ribosomal protein S16 | - |
| OVY33_RS10830 | rimM | 2219662..2220165 (+) | 504 | WP_103357338.1 | ribosome maturation factor RimM | - |
| OVY33_RS10835 | trmD | 2220162..2220884 (+) | 723 | WP_103357339.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| OVY33_RS10840 | rplS | 2221001..2221351 (+) | 351 | WP_044360991.1 | 50S ribosomal protein L19 | - |
| OVY33_RS10845 | - | 2221535..2222725 (+) | 1191 | WP_309306524.1 | XRE family transcriptional regulator | - |
| OVY33_RS10850 | - | 2223918..2224598 (+) | 681 | WP_103359005.1 | ABC transporter ATP-binding protein | - |
| OVY33_RS10855 | - | 2224588..2225742 (+) | 1155 | WP_103359006.1 | ABC transporter permease | - |
| OVY33_RS10860 | - | 2225739..2226359 (+) | 621 | WP_103359007.1 | CPBP family intramembrane glutamic endopeptidase | - |
| OVY33_RS10865 | - | 2226370..2226786 (+) | 417 | WP_103359008.1 | hypothetical protein | - |
| OVY33_RS10870 | - | 2227130..2229706 (-) | 2577 | WP_240624164.1 | YfhO family protein | - |
| OVY33_RS10875 | - | 2229739..2230125 (-) | 387 | WP_303350502.1 | GtrA family protein | - |
| OVY33_RS10880 | - | 2230295..2230432 (+) | 138 | WP_169926518.1 | hypothetical protein | - |
| OVY33_RS10885 | - | 2230813..2232381 (+) | 1569 | WP_309306377.1 | IS1182 family transposase | - |
| OVY33_RS10890 | - | 2232454..2234919 (-) | 2466 | WP_103358233.1 | YfhO family protein | - |
| OVY33_RS10895 | - | 2235335..2237197 (+) | 1863 | WP_103358234.1 | cation-translocating P-type ATPase | - |
| OVY33_RS10900 | - | 2237267..2237494 (+) | 228 | WP_103358235.1 | heavy-metal-associated domain-containing protein | - |
| OVY33_RS10905 | - | 2237507..2237776 (+) | 270 | WP_206167753.1 | hypothetical protein | - |
| OVY33_RS10910 | - | 2237813..2238466 (+) | 654 | WP_103358237.1 | Crp/Fnr family transcriptional regulator | - |
| OVY33_RS10915 | - | 2238605..2239117 (+) | 513 | WP_309306525.1 | NAD(P)H-dependent oxidoreductase | - |
| OVY33_RS10920 | ylqF | 2239406..2240287 (+) | 882 | WP_103358239.1 | ribosome biogenesis GTPase YlqF | - |
| OVY33_RS10925 | - | 2240265..2241062 (+) | 798 | WP_309306526.1 | ribonuclease HII | - |
| OVY33_RS10930 | - | 2241223..2241492 (+) | 270 | WP_103358241.1 | hypothetical protein | - |
| OVY33_RS10935 | sucC | 2241821..2242987 (+) | 1167 | WP_103358242.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| OVY33_RS10940 | sucD | 2243008..2243916 (+) | 909 | WP_103358243.1 | succinate--CoA ligase subunit alpha | - |
| OVY33_RS10945 | dprA | 2244070..2244948 (+) | 879 | WP_103358244.1 | DNA-processing protein DprA | Machinery gene |
| OVY33_RS10950 | topA | 2245051..2247120 (+) | 2070 | WP_103358245.1 | type I DNA topoisomerase | - |
| OVY33_RS10955 | trmFO | 2247144..2248451 (+) | 1308 | WP_103358246.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| OVY33_RS10960 | xerC | 2248570..2249460 (+) | 891 | WP_169926483.1 | tyrosine recombinase XerC | - |
| OVY33_RS10965 | hslV | 2249468..2250010 (+) | 543 | WP_103358248.1 | ATP-dependent protease subunit HslV | - |
| OVY33_RS10970 | hslU | 2250027..2251436 (+) | 1410 | WP_309306527.1 | ATP-dependent protease ATPase subunit HslU | - |
| OVY33_RS10975 | codY | 2251451..2252224 (+) | 774 | WP_103358250.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| OVY33_RS10980 | rpsB | 2252388..2253158 (+) | 771 | WP_103358251.1 | 30S ribosomal protein S2 | - |
| OVY33_RS10985 | tsf | 2253246..2254124 (+) | 879 | WP_103358252.1 | translation elongation factor Ts | - |
| OVY33_RS10990 | pyrH | 2254280..2255002 (+) | 723 | WP_103358253.1 | UMP kinase | - |
| OVY33_RS10995 | frr | 2255022..2255576 (+) | 555 | WP_103358254.1 | ribosome recycling factor | - |
| OVY33_RS11000 | - | 2255848..2256609 (+) | 762 | WP_103358255.1 | isoprenyl transferase | - |
| OVY33_RS11005 | - | 2256624..2257406 (+) | 783 | WP_103358256.1 | phosphatidate cytidylyltransferase | - |
| OVY33_RS11010 | - | 2257424..2258554 (+) | 1131 | WP_103358257.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| OVY33_RS11015 | rseP | 2258561..2259841 (+) | 1281 | WP_309306528.1 | RIP metalloprotease RseP | - |
| OVY33_RS11020 | - | 2259869..2261572 (+) | 1704 | WP_103358259.1 | proline--tRNA ligase | - |
| OVY33_RS11025 | - | 2261828..2266138 (+) | 4311 | WP_309306529.1 | PolC-type DNA polymerase III | - |
| OVY33_RS11030 | rimP | 2266263..2266730 (+) | 468 | WP_103358261.1 | ribosome maturation factor RimP | - |
| OVY33_RS11035 | nusA | 2266752..2267924 (+) | 1173 | WP_309306530.1 | transcription termination factor NusA | - |
| OVY33_RS11040 | rnpM | 2267936..2268223 (+) | 288 | WP_103358263.1 | RNase P modulator RnpM | - |
| OVY33_RS11045 | - | 2268220..2268528 (+) | 309 | WP_103358264.1 | YlxQ family RNA-binding protein | - |
| OVY33_RS11050 | infB | 2268540..2270660 (+) | 2121 | WP_309306531.1 | translation initiation factor IF-2 | - |
| OVY33_RS11055 | - | 2270822..2271124 (+) | 303 | WP_103358266.1 | hypothetical protein | - |
| OVY33_RS11060 | rbfA | 2271228..2271572 (+) | 345 | WP_103358267.1 | 30S ribosome-binding factor RbfA | - |
| OVY33_RS11065 | truB | 2271672..2272589 (+) | 918 | WP_103358268.1 | tRNA pseudouridine(55) synthase TruB | - |
| OVY33_RS11070 | - | 2272607..2273578 (+) | 972 | WP_103358269.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| OVY33_RS11075 | rpsO | 2273684..2273953 (+) | 270 | WP_103358270.1 | 30S ribosomal protein S15 | - |
| OVY33_RS11080 | pnp | 2274111..2276204 (+) | 2094 | WP_103358271.1 | polyribonucleotide nucleotidyltransferase | - |
| OVY33_RS11085 | - | 2276540..2277145 (+) | 606 | WP_103358272.1 | DUF6088 family protein | - |
| OVY33_RS11090 | rnjB | 2277438..2279111 (+) | 1674 | WP_309306532.1 | ribonuclease J2 | - |
| OVY33_RS11095 | - | 2279258..2281621 (+) | 2364 | WP_309306533.1 | DNA translocase FtsK | - |
| OVY33_RS11100 | - | 2281624..2282340 (+) | 717 | WP_103358275.1 | GntR family transcriptional regulator | - |
| OVY33_RS11105 | yfmF | 2282360..2283631 (+) | 1272 | WP_373694257.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| OVY33_RS11110 | yfmH | 2283624..2284913 (+) | 1290 | WP_103358277.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| OVY33_RS11115 | ymfI | 2284910..2285611 (+) | 702 | WP_103358278.1 | elongation factor P 5-aminopentanone reductase | - |
| OVY33_RS11120 | - | 2285660..2286499 (+) | 840 | WP_103358279.1 | YmfK family protein | - |
| OVY33_RS11125 | - | 2286515..2286910 (+) | 396 | WP_103358280.1 | RodZ family helix-turn-helix domain-containing protein | - |
| OVY33_RS11130 | pgsA | 2286949..2287533 (+) | 585 | WP_103358281.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| OVY33_RS11135 | - | 2287757..2288899 (+) | 1143 | WP_309306535.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| OVY33_RS11140 | recA | 2289108..2290157 (+) | 1050 | WP_103358283.1 | recombinase RecA | Machinery gene |
| OVY33_RS11145 | rny | 2290640..2292199 (+) | 1560 | WP_103358285.1 | ribonuclease Y | - |
| OVY33_RS11150 | - | 2292558..2292932 (+) | 375 | WP_103358286.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| OVY33_RS11155 | - | 2292922..2295072 (+) | 2151 | WP_309306536.1 | heavy metal translocating P-type ATPase | - |
| OVY33_RS11160 | - | 2295352..2296164 (+) | 813 | WP_103358288.1 | TIGR00282 family metallophosphoesterase | - |
| OVY33_RS11165 | - | 2296385..2298145 (+) | 1761 | WP_103358289.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| OVY33_RS11170 | - | 2298146..2299012 (+) | 867 | WP_103358290.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| OVY33_RS11175 | - | 2299177..2299353 (+) | 177 | WP_169926484.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 292 a.a. Molecular weight: 33415.40 Da Isoelectric Point: 9.4710
>NTDB_id=760302 OVY33_RS10945 WP_103358244.1 2244070..2244948(+) (dprA) [Staphylococcus rostri strain PJFA-333]
MILTTRHLLLLLVYSGFTTRQIYNYFPHIMNYQGTKQDLTKQLTQDLSQYNDARIQAKLQRFINLDIRMIEQALTNGKID
AVSIDDARYPQLLKHIYDPPLILFSRGNLALLQHSRTLAIVGSRQHTHYTNQALNVLFPHFAKARLTIISGLANGADAIA
HEQAIQFGCNTIAVLGFGHFHHYPKQTQKLRHHIDTHFLSISEYPPYTRPAKFRFPERNRLISGLSQGVLITEAKERSGA
LITVDQALDQNRNVYVLPGDMFNPYTKGNMLRVQEGAEIVLTEMDILKDYCQ
MILTTRHLLLLLVYSGFTTRQIYNYFPHIMNYQGTKQDLTKQLTQDLSQYNDARIQAKLQRFINLDIRMIEQALTNGKID
AVSIDDARYPQLLKHIYDPPLILFSRGNLALLQHSRTLAIVGSRQHTHYTNQALNVLFPHFAKARLTIISGLANGADAIA
HEQAIQFGCNTIAVLGFGHFHHYPKQTQKLRHHIDTHFLSISEYPPYTRPAKFRFPERNRLISGLSQGVLITEAKERSGA
LITVDQALDQNRNVYVLPGDMFNPYTKGNMLRVQEGAEIVLTEMDILKDYCQ
Nucleotide
Download Length: 879 bp
>NTDB_id=760302 OVY33_RS10945 WP_103358244.1 2244070..2244948(+) (dprA) [Staphylococcus rostri strain PJFA-333]
ATGATTTTAACGACCCGCCACTTGTTGCTACTCCTTGTTTATAGCGGATTTACGACCCGTCAAATTTACAACTATTTCCC
TCATATTATGAACTATCAAGGCACAAAACAGGATCTTACAAAACAGCTCACTCAGGATTTATCACAATATAATGATGCAC
GCATACAAGCAAAGCTACAACGATTTATCAACTTGGACATTCGTATGATAGAACAGGCATTAACCAATGGGAAAATTGAT
GCCGTTAGTATTGACGACGCCCGCTATCCGCAGTTACTCAAGCATATTTATGATCCACCACTCATTCTTTTTTCTCGTGG
CAATTTAGCCCTTTTACAACATAGTCGCACGTTAGCTATTGTTGGTTCACGTCAGCATACACACTATACGAATCAAGCGT
TAAATGTGCTATTTCCTCATTTTGCCAAAGCGCGGTTAACAATCATTTCAGGATTAGCCAATGGTGCAGATGCCATTGCG
CATGAACAAGCAATCCAATTTGGTTGTAATACGATTGCAGTCTTAGGTTTCGGCCATTTTCATCACTATCCCAAACAAAC
ACAAAAGCTACGTCACCATATTGACACCCATTTTCTAAGTATTAGCGAATATCCTCCCTATACACGACCTGCCAAGTTTC
GTTTTCCCGAGCGCAATCGCCTGATTAGTGGTCTTTCACAAGGTGTGCTCATTACAGAAGCGAAAGAACGTAGTGGTGCA
TTGATTACTGTTGATCAAGCACTCGACCAAAATCGCAATGTATATGTTTTGCCCGGTGATATGTTTAATCCTTATACAAA
GGGGAACATGTTAAGGGTTCAAGAAGGGGCTGAAATCGTATTGACAGAAATGGATATTTTGAAAGATTATTGTCAATAA
ATGATTTTAACGACCCGCCACTTGTTGCTACTCCTTGTTTATAGCGGATTTACGACCCGTCAAATTTACAACTATTTCCC
TCATATTATGAACTATCAAGGCACAAAACAGGATCTTACAAAACAGCTCACTCAGGATTTATCACAATATAATGATGCAC
GCATACAAGCAAAGCTACAACGATTTATCAACTTGGACATTCGTATGATAGAACAGGCATTAACCAATGGGAAAATTGAT
GCCGTTAGTATTGACGACGCCCGCTATCCGCAGTTACTCAAGCATATTTATGATCCACCACTCATTCTTTTTTCTCGTGG
CAATTTAGCCCTTTTACAACATAGTCGCACGTTAGCTATTGTTGGTTCACGTCAGCATACACACTATACGAATCAAGCGT
TAAATGTGCTATTTCCTCATTTTGCCAAAGCGCGGTTAACAATCATTTCAGGATTAGCCAATGGTGCAGATGCCATTGCG
CATGAACAAGCAATCCAATTTGGTTGTAATACGATTGCAGTCTTAGGTTTCGGCCATTTTCATCACTATCCCAAACAAAC
ACAAAAGCTACGTCACCATATTGACACCCATTTTCTAAGTATTAGCGAATATCCTCCCTATACACGACCTGCCAAGTTTC
GTTTTCCCGAGCGCAATCGCCTGATTAGTGGTCTTTCACAAGGTGTGCTCATTACAGAAGCGAAAGAACGTAGTGGTGCA
TTGATTACTGTTGATCAAGCACTCGACCAAAATCGCAATGTATATGTTTTGCCCGGTGATATGTTTAATCCTTATACAAA
GGGGAACATGTTAAGGGTTCAAGAAGGGGCTGAAATCGTATTGACAGAAATGGATATTTTGAAAGATTATTGTCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Staphylococcus aureus MW2 |
50.35 |
97.945 |
0.493 |
| dprA | Staphylococcus aureus N315 |
50.35 |
97.945 |
0.493 |