Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   OVY33_RS02895 Genome accession   NZ_CP113107
Coordinates   573892..574935 (-) Length   347 a.a.
NCBI ID   WP_103357166.1    Uniprot ID   A0A2K3YWT7
Organism   Staphylococcus rostri strain PJFA-333     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 568892..579935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OVY33_RS02865 - 569964..570170 (-) 207 WP_103357178.1 DUF1128 family protein -
  OVY33_RS02870 - 570303..570761 (+) 459 WP_103357161.1 low molecular weight protein-tyrosine-phosphatase -
  OVY33_RS02875 - 570765..571046 (+) 282 WP_309306684.1 YtxH domain-containing protein -
  OVY33_RS02880 - 571282..572607 (+) 1326 WP_103357163.1 YihY/virulence factor BrkB family protein -
  OVY33_RS02885 - 572640..573215 (+) 576 WP_103357164.1 carbonic anhydrase -
  OVY33_RS02890 vraR 573273..573902 (-) 630 WP_103357165.1 response regulator transcription factor Regulator
  OVY33_RS02895 vraS 573892..574935 (-) 1044 WP_103357166.1 sensor histidine kinase Regulator
  OVY33_RS02900 liaF 574932..575633 (-) 702 WP_103357167.1 cell wall-active antibiotics response protein LiaF -
  OVY33_RS02905 - 575646..576035 (-) 390 WP_103357168.1 hypothetical protein -
  OVY33_RS02910 map 576133..576894 (-) 762 WP_103357169.1 type I methionyl aminopeptidase -
  OVY33_RS02915 - 576991..577989 (+) 999 WP_103357170.1 aromatic acid exporter family protein -
  OVY33_RS02920 - 578114..578839 (-) 726 WP_103357171.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39979.23 Da        Isoelectric Point: 5.1226

>NTDB_id=760283 OVY33_RS02895 WP_103357166.1 573892..574935(-) (vraS) [Staphylococcus rostri strain PJFA-333]
MNHYVRTIGAMLILVYAMFTAFFFIDKVFVNIIFFQGMFYQQIFGIPVFLFLNLLVVFLCILVGSIIAYKINQQNDWLQE
QIERAIQGETVGINDHQIELYNETITLYQTLVPLNQELHKLRIKTQNLTNEQYNMNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLAPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKTLGEGIESLVTDLQRKVPMKVMYEI
DNFDVPKGIEDHLFRITQEAISNTLRHANGTQVSVELLNREGYLLLRIQDDGIGFNPDDKMEQSYGLKNMRERATEIGAT
FHIVSLPNAGTRIEVKAPLDKEGQYDS

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=760283 OVY33_RS02895 WP_103357166.1 573892..574935(-) (vraS) [Staphylococcus rostri strain PJFA-333]
ATGAATCACTACGTGCGTACGATTGGAGCCATGTTGATTTTGGTATATGCGATGTTTACAGCTTTTTTCTTTATCGATAA
AGTGTTTGTAAATATTATCTTTTTTCAAGGCATGTTTTATCAGCAAATATTCGGTATTCCCGTTTTTCTATTTTTGAACT
TACTTGTTGTATTTTTGTGTATCCTTGTTGGCAGTATCATTGCGTATAAAATCAATCAGCAAAATGATTGGTTACAAGAA
CAGATTGAACGCGCCATTCAAGGAGAAACAGTGGGTATCAATGATCATCAAATCGAATTATATAATGAAACGATTACGTT
GTATCAAACGCTTGTACCGCTCAATCAAGAGTTGCACAAGTTGCGTATTAAAACGCAGAATTTAACAAATGAACAATACA
ATATGAATGATTTAAAAGTGAAGAAAATTATTGAAGATGAACGTCAACGTTTGGCACGTGAGTTGCATGATAGCGTGTCG
CAACAACTATTTGCGGCGAGTATGATGTTATCAGCCATTAAAGAAACGGATCTTGCGCCACCATTGGATCAACAAATTCC
AACACTGGAAAAAATGGTACAGGATTCACAATTAGAGATGCGCGCACTATTGCTTCATTTACGACCGATTGGTTTGAAAG
ATAAGACGCTAGGTGAAGGCATTGAGTCATTAGTAACGGACTTACAGCGTAAAGTACCGATGAAAGTGATGTATGAGATT
GATAACTTTGATGTACCAAAAGGCATTGAAGATCATCTTTTCCGTATTACACAAGAGGCGATTTCGAATACGCTACGTCA
TGCGAATGGTACGCAGGTGAGTGTGGAGTTGCTGAATCGTGAAGGCTATCTGTTACTGCGCATTCAAGATGATGGTATTG
GCTTTAATCCTGATGATAAGATGGAACAAAGTTATGGACTTAAAAATATGAGAGAACGTGCGACGGAAATCGGTGCAACA
TTCCATATTGTATCGTTACCAAATGCAGGCACGCGAATTGAAGTAAAAGCACCATTAGATAAGGAGGGACAATATGACAG
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K3YWT7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.503

99.712

0.813