Detailed information NTG0760275

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: OVY33_RS01030
• Genome accession: NZ_CP113107
• Coordinates: 211658..212632 (+)
• Length: 324 a.a.
• NCBI ID: WP_103357707.1
• Uniprot ID: -
• Organism: Staphylococcus rostri strain PJFA-333
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 206658..217632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OVY33_RS00995	rpmG	206862..207011 (+)	150	WP_044358954.1	50S ribosomal protein L33	-
OVY33_RS01000	-	207444..207998 (+)	555	WP_103357701.1	5-formyltetrahydrofolate cyclo-ligase	-
OVY33_RS01005	-	208000..209439 (+)	1440	WP_103357702.1	rhomboid family intramembrane serine protease	-
OVY33_RS01010	-	209441..209644 (+)	204	WP_103357703.1	YqgQ family protein	-
OVY33_RS01015	-	209641..210624 (+)	984	WP_103357704.1	ROK family glucokinase	-
OVY33_RS01020	-	210628..210939 (+)	312	WP_103357705.1	MTH1187 family thiamine-binding protein	-
OVY33_RS01025	-	210967..211590 (+)	624	WP_309306623.1	MBL fold metallo-hydrolase	-
OVY33_RS01030	comGA	211658..212632 (+)	975	WP_103357707.1	competence type IV pilus ATPase ComGA	Machinery gene
OVY33_RS01035	comGB	212598..213665 (+)	1068	WP_240624114.1	competence type IV pilus assembly protein ComGB	-
OVY33_RS01040	comGC	213681..214001 (+)	321	WP_103357708.1	competence type IV pilus major pilin ComGC	Machinery gene
OVY33_RS01045	comGD	213958..214422 (+)	465	WP_142381177.1	competence type IV pilus minor pilin ComGD	-
OVY33_RS01050	-	214618..215100 (+)	483	WP_240624116.1	ComGF family competence protein	-
OVY33_RS01055	-	215266..215790 (+)	525	WP_103357712.1	shikimate kinase	-
OVY33_RS01060	gcvT	215954..217045 (+)	1092	WP_103357713.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36711.38 Da
• Isoelectric Point: 6.8213

>NTDB_id=760275 OVY33_RS01030 WP_103357707.1 211658..212632(+) (comGA) [Staphylococcus rostri strain PJFA-333]
MQFLLDTVLQHALRENASDVHFIPSSEQVEVKLRIKDQLVRYDTLNLETYQRLLTLLKFQAGLDVSSRHRAQSGRYIYHC
KDLYHLRVSTLPLNLGTESCVIRITPQYFQNISLKSTTDICNVMEKKQGLILFSGPTGAGKSTLMYQMVLYAKQALNLNI
ITIEDPVEQLLNGVTQISVNEKADITYSASLKAILRCDPDVILIGEIRDAKIAREVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGISHQDLLQAINLIVNQRLVTTTQQQRQLVYETMMHDDIEHFLSNDFQLPDSFTSLTDKLSLLKQEGVIDAATLR
KYQK

Nucleotide

• Length: 975 bp

>NTDB_id=760275 OVY33_RS01030 WP_103357707.1 211658..212632(+) (comGA) [Staphylococcus rostri strain PJFA-333]
ATGCAGTTTTTATTAGACACTGTGTTACAACATGCGTTACGTGAAAATGCTTCAGACGTTCATTTTATACCATCTTCAGA
GCAGGTTGAAGTTAAGTTGCGTATTAAAGACCAACTAGTACGCTATGATACATTGAATTTAGAAACGTACCAACGCTTGC
TAACGCTACTCAAATTTCAAGCTGGGTTAGATGTTTCTTCAAGGCATCGGGCGCAAAGTGGGCGCTACATTTATCATTGC
AAAGATTTATACCATTTACGTGTTTCTACTTTGCCCTTGAACTTAGGTACAGAAAGTTGCGTCATACGGATTACTCCACA
ATATTTTCAAAATATCTCACTTAAAAGCACTACAGATATTTGTAATGTGATGGAGAAAAAGCAAGGGCTCATCTTGTTTA
GCGGGCCAACTGGTGCTGGAAAAAGTACGCTTATGTATCAAATGGTACTGTATGCGAAACAAGCATTGAATCTCAATATT
ATTACGATTGAAGACCCTGTAGAACAGCTTTTAAACGGTGTGACGCAAATTTCAGTGAATGAAAAAGCCGATATCACGTA
TAGCGCATCTTTAAAAGCGATACTACGTTGTGATCCAGATGTCATACTTATCGGCGAGATACGAGATGCTAAAATTGCAC
GCGAAGTGATTCAAGCAAGTTTAAGTGGGCATCTCGTCTTATCAACCATTCATGCTAATGACTGCCAAGGCGTTTTGCTC
AGACTAATAGAAATGGGCATCTCTCATCAAGATTTACTTCAAGCCATCAATTTAATTGTCAATCAACGACTCGTCACGAC
AACGCAACAGCAACGACAACTCGTCTATGAAACGATGATGCACGATGACATTGAACACTTTTTATCGAATGACTTCCAAT
TACCTGATTCATTTACATCTCTTACTGATAAACTAAGTTTGCTCAAACAAGAAGGGGTGATTGACGCTGCAACGCTTCGC
AAGTATCAAAAATAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	59.385	100	0.596
comGA	Staphylococcus aureus N315	59.385	100	0.596