Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   OSZ56_RS01450 Genome accession   NZ_CP113105
Coordinates   273564..274250 (+) Length   228 a.a.
NCBI ID   WP_078059847.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BIAI 117     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 268564..279250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSZ56_RS01415 (OSZ56_01415) yqeH 269091..270191 (+) 1101 WP_001280132.1 ribosome biogenesis GTPase YqeH -
  OSZ56_RS01420 (OSZ56_01420) aroE 270205..271011 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  OSZ56_RS01425 (OSZ56_01425) yhbY 271015..271305 (+) 291 WP_000955232.1 ribosome assembly RNA-binding protein YhbY -
  OSZ56_RS01430 (OSZ56_01430) nadD 271308..271877 (+) 570 WP_000822938.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  OSZ56_RS01435 (OSZ56_01435) yqeK 271867..272451 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  OSZ56_RS01440 (OSZ56_01440) rsfS 272452..272805 (+) 354 WP_001088020.1 ribosome silencing factor -
  OSZ56_RS01445 (OSZ56_01445) - 272808..273524 (+) 717 WP_000084835.1 class I SAM-dependent DNA methyltransferase -
  OSZ56_RS01450 (OSZ56_01450) comEA 273564..274250 (+) 687 WP_078059847.1 ComEA family DNA-binding protein Machinery gene
  OSZ56_RS01455 (OSZ56_01455) - 274342..274803 (+) 462 WP_000439692.1 ComE operon protein 2 -
  OSZ56_RS01460 (OSZ56_01460) - 274808..277008 (+) 2201 Protein_253 DNA internalization-related competence protein ComEC/Rec2 -
  OSZ56_RS01465 (OSZ56_01465) holA 277065..278039 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  OSZ56_RS01470 (OSZ56_01470) rpsT 278084..278335 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25768.35 Da        Isoelectric Point: 9.3383

>NTDB_id=760203 OSZ56_RS01450 WP_078059847.1 273564..274250(+) (comEA) [Staphylococcus aureus strain BIAI 117]
MVLLYQFLLRYKDFLAQWKLYTISAVVLIMVLIGFIFWRQDDYTSRDFENKDTVLKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKAQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLNSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=760203 OSZ56_RS01450 WP_078059847.1 273564..274250(+) (comEA) [Staphylococcus aureus strain BIAI 117]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAGCTCAATGGAAGTTATATACTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
TTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGCACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAATTCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

94.714

99.561

0.943
  comEA Staphylococcus aureus N315

94.714

99.561

0.943