Detailed information NTG0759886

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: OSH17_RS15925
• Genome accession: NZ_CP113073
• Coordinates: 3404748..3405608 (+)
• Length: 286 a.a.
• NCBI ID: WP_001152274.1
• Uniprot ID: A0AAP1QVT1
• Organism: Acinetobacter baumannii strain A118 DeltaH0N27_10820::kan H0N27_10830-K176N
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3399748..3410608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSH17_RS15905 (OSH17_15905)	secG	3400353..3400682 (-)	330	WP_000555570.1	preprotein translocase subunit SecG	-
OSH17_RS15910 (OSH17_15910)	tpiA	3400695..3401489 (-)	795	WP_000016939.1	triose-phosphate isomerase	-
OSH17_RS15915 (OSH17_15915)	pilB	3401780..3403492 (+)	1713	WP_001274989.1	type IV-A pilus assembly ATPase PilB	Machinery gene
OSH17_RS15920 (OSH17_15920)	pilC	3403522..3404748 (+)	1227	WP_000279216.1	type II secretion system F family protein	Machinery gene
OSH17_RS15925 (OSH17_15925)	pilD	3404748..3405608 (+)	861	WP_001152274.1	A24 family peptidase	Machinery gene
OSH17_RS15930 (OSH17_15930)	coaE	3405610..3406206 (+)	597	WP_000874125.1	dephospho-CoA kinase	-
OSH17_RS15935 (OSH17_15935)	-	3406203..3407117 (-)	915	WP_000075015.1	DMT family transporter	-
OSH17_RS15940 (OSH17_15940)	rlmB	3407153..3407902 (-)	750	WP_001118149.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
OSH17_RS15945 (OSH17_15945)	-	3408004..3408330 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
OSH17_RS15950 (OSH17_15950)	-	3408407..3409717 (-)	1311	WP_168726864.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32078.49 Da
• Isoelectric Point: 7.1041

>NTDB_id=759886 OSH17_RS15925 WP_001152274.1 3404748..3405608(+) (pilD) [Acinetobacter baumannii strain A118 DeltaH0N27_10820::kan H0N27_10830-K176N]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLMLRGKCGHCQHPISIRYPAVELLTMLCSLVVVMVFGPTIQMLFGLVLTWVLIALTFIDFDTQLLPDR
FTLTLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=759886 OSH17_RS15925 WP_001152274.1 3404748..3405608(+) (pilD) [Acinetobacter baumannii strain A118 DeltaH0N27_10820::kan H0N27_10830-K176N]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACGCCAAAAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCGATTATTGATCATGAGAAGTTAACTTTAAGTAAGCCTGCTTCATCGTGCCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCTGTTATAAGCTGGCTTATGTTAAGAGGAAAGTGTGGCCATTGCCAGCACCCGATTAG
TATTCGCTATCCAGCCGTCGAACTACTCACCATGCTATGTTCATTAGTAGTCGTCATGGTGTTTGGTCCAACCATACAAA
TGCTTTTTGGACTCGTCCTCACATGGGTACTGATAGCCCTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCCTAACTTTAGCTGCGCTCGGCTTAGGTATTAATACCTTTAATATTTATACCTCACCCAACTCAGCCATTTGGGG
TTATCTCATTGGTTTCCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTGATCACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCAGCATTAGGAGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCTTTTGGGCCATATATTGCCAT
TGCTGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	98.252	100	0.983
pilD	Acinetobacter nosocomialis M2	97.902	100	0.979
pilD	Vibrio cholerae strain A1552	53.309	95.105	0.507
pilD	Vibrio campbellii strain DS40M4	52.03	94.755	0.493
pilD	Neisseria gonorrhoeae MS11	46.97	92.308	0.434