Detailed information NTG0759820

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OSH16_RS09600
• Genome accession: NZ_CP113072
• Coordinates: 2057262..2057963 (-)
• Length: 233 a.a.
• NCBI ID: WP_032025534.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A118 DeltaH0N27_10820-30::kan
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2052262..2062963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSH16_RS09570 (OSH16_09570)	-	2052569..2053012 (-)	444	WP_001246675.1	SRPBCC family protein	-
OSH16_RS09575 (OSH16_09575)	tadA	2053082..2053585 (-)	504	WP_031946509.1	tRNA adenosine(34) deaminase TadA	-
OSH16_RS09580 (OSH16_09580)	-	2053592..2054716 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OSH16_RS09585 (OSH16_09585)	ung	2054713..2055426 (-)	714	WP_001177530.1	uracil-DNA glycosylase	-
OSH16_RS09590 (OSH16_09590)	-	2055477..2056073 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
OSH16_RS09595 (OSH16_09595)	gspK	2056303..2057262 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
OSH16_RS09600 (OSH16_09600)	xcpW	2057262..2057963 (-)	702	WP_032025534.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OSH16_RS09605 (OSH16_09605)	xcpV	2057963..2058343 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
OSH16_RS09610 (OSH16_09610)	-	2058333..2058887 (-)	555	WP_000841371.1	type II secretion system protein	-
OSH16_RS09615 (OSH16_09615)	-	2058897..2059505 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OSH16_RS09620 (OSH16_09620)	-	2059543..2060316 (-)	774	WP_000497302.1	TatD family hydrolase	-
OSH16_RS09625 (OSH16_09625)	-	2060334..2060675 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
OSH16_RS09630 (OSH16_09630)	-	2060687..2061667 (-)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
OSH16_RS09635 (OSH16_09635)	kdsB	2061679..2062440 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26656.61 Da
• Isoelectric Point: 9.5501

>NTDB_id=759820 OSH16_RS09600 WP_032025534.1 2057262..2057963(-) (xcpW) [Acinetobacter baumannii strain A118 DeltaH0N27_10820-30::kan]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=759820 OSH16_RS09600 WP_032025534.1 2057262..2057963(-) (xcpW) [Acinetobacter baumannii strain A118 DeltaH0N27_10820-30::kan]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991