Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P7I82_RS29880 Genome accession   NZ_CP124652
Coordinates   6330769..6331176 (-) Length   135 a.a.
NCBI ID   WP_282426010.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain 2020CK-00443     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6325769..6336176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7I82_RS29860 (P7I82_29860) pilK 6326701..6327576 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  P7I82_RS29865 (P7I82_29865) pilJ 6327637..6329685 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  P7I82_RS29870 (P7I82_29870) - 6329770..6330306 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  P7I82_RS29875 (P7I82_29875) pilH 6330357..6330722 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  P7I82_RS29880 (P7I82_29880) pilG 6330769..6331176 (-) 408 WP_282426010.1 twitching motility response regulator PilG Regulator
  P7I82_RS29885 (P7I82_29885) gshB 6331431..6332384 (+) 954 WP_003100943.1 glutathione synthase -
  P7I82_RS29890 (P7I82_29890) - 6332531..6333424 (+) 894 WP_003084580.1 TonB family protein -
  P7I82_RS29895 (P7I82_29895) - 6333473..6334042 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  P7I82_RS29900 (P7I82_29900) ruvX 6334042..6334476 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  P7I82_RS29905 (P7I82_29905) pyrR 6334588..6335100 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  P7I82_RS29910 (P7I82_29910) - 6335124..6336128 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14742.18 Da        Isoelectric Point: 7.1340

>NTDB_id=759812 P7I82_RS29880 WP_282426010.1 6330769..6331176(-) (pilG) [Pseudomonas aeruginosa strain 2020CK-00443]
MEQQSDGLKVMVIDDSKTIRRTVETLLKKVGCDVITAIDGFDALAKIADPHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=759812 P7I82_RS29880 WP_282426010.1 6330769..6331176(-) (pilG) [Pseudomonas aeruginosa strain 2020CK-00443]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGTCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATCCCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.016

94.074

0.696
  vicR Streptococcus mutans UA159

44.444

86.667

0.385