Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   OS088_RS08045 Genome accession   NZ_CP113051
Coordinates   1581152..1582195 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain Viktor     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1576152..1587195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS088_RS08015 - 1576573..1577829 (-) 1257 WP_001793428.1 aminopeptidase -
  OS088_RS08020 - 1577832..1578032 (-) 201 WP_000180460.1 DUF1128 family protein -
  OS088_RS08025 - 1578179..1578643 (+) 465 WP_154284135.1 low molecular weight protein-tyrosine-phosphatase -
  OS088_RS08030 - 1578650..1578925 (+) 276 WP_154284136.1 YtxH domain-containing protein -
  OS088_RS08035 - 1579203..1580420 (+) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  OS088_RS08040 vraR 1580533..1581162 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  OS088_RS08045 vraS 1581152..1582195 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  OS088_RS08050 liaF 1582192..1582893 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  OS088_RS08055 - 1582908..1583294 (-) 387 WP_001110179.1 hypothetical protein -
  OS088_RS08060 map 1583511..1584269 (-) 759 WP_000636144.1 type I methionyl aminopeptidase -
  OS088_RS08065 - 1584736..1585722 (+) 987 WP_154284137.1 FUSC family protein -
  OS088_RS08070 - 1586153..1586566 (-) 414 WP_154284138.1 hypothetical protein -
  OS088_RS08075 - 1586595..1586705 (-) 111 WP_154284139.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=759596 OS088_RS08045 WP_001017131.1 1581152..1582195(-) (vraS) [Staphylococcus aureus strain Viktor]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=759596 OS088_RS08045 WP_001017131.1 1581152..1582195(-) (vraS) [Staphylococcus aureus strain Viktor]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTTTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTACGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1