Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   P7I80_RS11040 Genome accession   NZ_CP124649
Coordinates   2342136..2342492 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 2020CK-00218     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2337136..2347492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7I80_RS11015 (P7I80_11015) fabF 2337348..2338592 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  P7I80_RS11020 (P7I80_11020) pabC 2338592..2339407 (+) 816 WP_003091129.1 aminodeoxychorismate lyase -
  P7I80_RS11025 (P7I80_11025) mltG 2339413..2340462 (+) 1050 WP_003091127.1 endolytic transglycosylase MltG -
  P7I80_RS11030 (P7I80_11030) tmk 2340491..2341123 (+) 633 WP_003122486.1 dTMP kinase -
  P7I80_RS11035 (P7I80_11035) - 2341116..2342102 (+) 987 WP_003091122.1 DNA polymerase III subunit delta' -
  P7I80_RS11040 (P7I80_11040) pilZ 2342136..2342492 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  P7I80_RS11045 (P7I80_11045) - 2342507..2343283 (+) 777 WP_023095396.1 TatD family hydrolase -
  P7I80_RS11050 (P7I80_11050) - 2343509..2344642 (-) 1134 WP_003091115.1 aminotransferase class V-fold PLP-dependent enzyme -
  P7I80_RS11055 (P7I80_11055) - 2344728..2345366 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  P7I80_RS11060 (P7I80_11060) - 2345516..2346412 (+) 897 WP_003091113.1 radical SAM protein -
  P7I80_RS11065 (P7I80_11065) - 2346477..2347109 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=759547 P7I80_RS11040 WP_003091119.1 2342136..2342492(+) (pilZ) [Pseudomonas aeruginosa strain 2020CK-00218]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=759547 P7I80_RS11040 WP_003091119.1 2342136..2342492(+) (pilZ) [Pseudomonas aeruginosa strain 2020CK-00218]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449