Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   OS087_RS10125 Genome accession   NZ_CP113047
Coordinates   2010578..2011564 (+) Length   328 a.a.
NCBI ID   WP_000959288.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sett     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2005578..2016564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS087_RS10100 opp4B 2005790..2006752 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  OS087_RS10105 opp4C 2006764..2007645 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  OS087_RS10110 trpS 2007687..2008676 (-) 990 WP_267830372.1 tryptophan--tRNA ligase -
  OS087_RS10115 spxA 2008971..2009366 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  OS087_RS10120 mecA 2009738..2010457 (+) 720 WP_001217728.1 adaptor protein MecA -
  OS087_RS10125 coiA 2010578..2011564 (+) 987 WP_000959288.1 competence protein CoiA Machinery gene
  OS087_RS10130 pepF 2011612..2013420 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  OS087_RS10135 yjbH 2013880..2014686 (-) 807 WP_000896696.1 protease adaptor protein YjbH -
  OS087_RS10140 - 2014709..2015074 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  OS087_RS10145 - 2015178..2015771 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  OS087_RS10150 - 2015957..2016304 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38899.50 Da        Isoelectric Point: 9.5881

>NTDB_id=759501 OS087_RS10125 WP_000959288.1 2010578..2011564(+) (coiA) [Staphylococcus aureus strain Sett]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFTINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=759501 OS087_RS10125 WP_000959288.1 2010578..2011564(+) (coiA) [Staphylococcus aureus strain Sett]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCA
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

98.78

100

0.988
  coiA Staphylococcus aureus N315

98.171

100

0.982