Detailed information
Bioinformatically predicted
Overview
| Name | recF | Type | Machinery gene |
| Locus tag | LDO10_RS00675 | Genome accession | NZ_AP024929 |
| Coordinates | 119660..120691 (-) | Length | 343 a.a. |
| NCBI ID | WP_223965847.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain AA2-2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 114660..125691
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO10_RS00650 (TthAA22_01230) | pilD | 115614..116690 (+) | 1077 | WP_223971223.1 | A24 family peptidase | Machinery gene |
| LDO10_RS00655 (TthAA22_01240) | - | 116728..117231 (+) | 504 | WP_143584241.1 | DUF2939 domain-containing protein | - |
| LDO10_RS00660 (TthAA22_01250) | - | 117245..118165 (+) | 921 | WP_143584244.1 | nitroreductase family protein | - |
| LDO10_RS00665 (TthAA22_01260) | - | 118119..118916 (-) | 798 | WP_223971225.1 | C40 family peptidase | - |
| LDO10_RS00670 (TthAA22_01270) | - | 118917..119675 (-) | 759 | WP_041443621.1 | DUF721 domain-containing protein | - |
| LDO10_RS00675 (TthAA22_01280) | recF | 119660..120691 (-) | 1032 | WP_223965847.1 | DNA replication and repair protein RecF | Machinery gene |
| LDO10_RS00680 (TthAA22_01290) | - | 120693..121865 (-) | 1173 | WP_143584253.1 | MFS transporter | - |
| LDO10_RS00685 (TthAA22_01300) | pstB | 121875..122657 (-) | 783 | WP_143584255.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| LDO10_RS00690 (TthAA22_01310) | pstA | 122658..123503 (-) | 846 | WP_143584258.1 | phosphate ABC transporter permease PstA | - |
| LDO10_RS00695 (TthAA22_01320) | pstC | 123500..124447 (-) | 948 | WP_223971226.1 | phosphate ABC transporter permease subunit PstC | - |
| LDO10_RS00700 (TthAA22_01330) | pstS | 124511..125587 (-) | 1077 | WP_223971227.1 | phosphate ABC transporter substrate-binding protein PstS | - |
Sequence
Protein
Download Length: 343 a.a. Molecular weight: 37792.64 Da Isoelectric Point: 8.9580
>NTDB_id=75886 LDO10_RS00675 WP_223965847.1 119660..120691(-) (recF) [Thermus thermophilus strain AA2-2]
MRLLLFRQRNFRNLALEAYRPPPGLSALVGANAQGKTSLLLGIHLALGGEVPLGLADLVRFGEEEAWLHAEVETELGAYR
LEHRLGPGGREVFLNGKRVSLRALWELPGSVLVSPLDLEAVLGPKEERRAYLDRLIARFSRRYAALLSAYEKALRQRNAL
LKAGGEGLSAWDRELARYGDEIVALRRRFLRRFAPILREVHAALAAKEAGLRLEETAGEGVLRALEASRAEERERGQTLV
GPHRDDLVFLLEGRPAHRFASRGEAKTLALALRLAEHRLLGEHHGEPPLLLVDEWGEELDEARRRAVLAYAQALPQAILA
GLEAPPGVPVCSVVRGVVLCPGA
MRLLLFRQRNFRNLALEAYRPPPGLSALVGANAQGKTSLLLGIHLALGGEVPLGLADLVRFGEEEAWLHAEVETELGAYR
LEHRLGPGGREVFLNGKRVSLRALWELPGSVLVSPLDLEAVLGPKEERRAYLDRLIARFSRRYAALLSAYEKALRQRNAL
LKAGGEGLSAWDRELARYGDEIVALRRRFLRRFAPILREVHAALAAKEAGLRLEETAGEGVLRALEASRAEERERGQTLV
GPHRDDLVFLLEGRPAHRFASRGEAKTLALALRLAEHRLLGEHHGEPPLLLVDEWGEELDEARRRAVLAYAQALPQAILA
GLEAPPGVPVCSVVRGVVLCPGA
Nucleotide
Download Length: 1032 bp
>NTDB_id=75886 LDO10_RS00675 WP_223965847.1 119660..120691(-) (recF) [Thermus thermophilus strain AA2-2]
ATGCGGCTTCTCCTCTTCCGGCAACGGAACTTCCGCAACCTGGCCCTGGAGGCCTACCGCCCCCCGCCGGGCCTTTCCGC
CCTGGTGGGGGCCAACGCCCAGGGGAAGACGAGCCTCCTCCTGGGGATCCACCTGGCCCTAGGGGGGGAGGTCCCCCTGG
GCCTTGCCGACCTCGTCCGCTTCGGGGAGGAGGAGGCTTGGCTCCACGCCGAGGTGGAGACGGAGCTCGGGGCCTACCGC
CTGGAGCACCGCCTGGGCCCCGGGGGGCGGGAGGTCTTCCTCAACGGGAAGCGGGTGAGCCTTCGGGCCCTTTGGGAGCT
TCCCGGCTCGGTCCTCGTCTCCCCTCTGGACCTCGAGGCGGTCCTCGGGCCCAAGGAGGAGCGGCGGGCCTACCTGGACC
GGCTCATCGCCCGCTTTTCCCGCCGCTACGCCGCCCTCCTTTCCGCCTACGAGAAGGCGCTGCGCCAGCGGAACGCCCTC
CTCAAGGCCGGGGGGGAGGGTCTTTCCGCCTGGGACCGGGAGCTCGCCCGCTACGGGGACGAGATCGTGGCCCTGAGGCG
CCGCTTCCTCCGGCGCTTCGCCCCCATCCTGCGGGAGGTCCACGCCGCCCTCGCCGCCAAGGAGGCGGGGCTTCGCTTGG
AGGAGACCGCGGGGGAAGGGGTGCTCCGGGCCCTCGAGGCCAGCCGGGCCGAGGAGCGGGAGCGGGGCCAGACCCTGGTG
GGGCCCCACCGGGACGACCTGGTCTTCCTCCTGGAGGGGCGGCCCGCCCACCGGTTCGCCAGCCGCGGGGAGGCCAAGAC
CCTGGCCCTGGCCCTGCGCCTCGCCGAGCACCGCCTCCTCGGCGAGCACCACGGCGAGCCCCCCCTCCTCCTCGTGGACG
AGTGGGGGGAGGAGCTGGACGAGGCCCGCAGGCGGGCCGTCCTCGCCTACGCCCAGGCCCTGCCCCAGGCCATCCTGGCG
GGGCTGGAAGCCCCCCCGGGGGTGCCGGTATGCTCGGTGGTACGAGGGGTGGTCCTGTGCCCTGGCGCCTGA
ATGCGGCTTCTCCTCTTCCGGCAACGGAACTTCCGCAACCTGGCCCTGGAGGCCTACCGCCCCCCGCCGGGCCTTTCCGC
CCTGGTGGGGGCCAACGCCCAGGGGAAGACGAGCCTCCTCCTGGGGATCCACCTGGCCCTAGGGGGGGAGGTCCCCCTGG
GCCTTGCCGACCTCGTCCGCTTCGGGGAGGAGGAGGCTTGGCTCCACGCCGAGGTGGAGACGGAGCTCGGGGCCTACCGC
CTGGAGCACCGCCTGGGCCCCGGGGGGCGGGAGGTCTTCCTCAACGGGAAGCGGGTGAGCCTTCGGGCCCTTTGGGAGCT
TCCCGGCTCGGTCCTCGTCTCCCCTCTGGACCTCGAGGCGGTCCTCGGGCCCAAGGAGGAGCGGCGGGCCTACCTGGACC
GGCTCATCGCCCGCTTTTCCCGCCGCTACGCCGCCCTCCTTTCCGCCTACGAGAAGGCGCTGCGCCAGCGGAACGCCCTC
CTCAAGGCCGGGGGGGAGGGTCTTTCCGCCTGGGACCGGGAGCTCGCCCGCTACGGGGACGAGATCGTGGCCCTGAGGCG
CCGCTTCCTCCGGCGCTTCGCCCCCATCCTGCGGGAGGTCCACGCCGCCCTCGCCGCCAAGGAGGCGGGGCTTCGCTTGG
AGGAGACCGCGGGGGAAGGGGTGCTCCGGGCCCTCGAGGCCAGCCGGGCCGAGGAGCGGGAGCGGGGCCAGACCCTGGTG
GGGCCCCACCGGGACGACCTGGTCTTCCTCCTGGAGGGGCGGCCCGCCCACCGGTTCGCCAGCCGCGGGGAGGCCAAGAC
CCTGGCCCTGGCCCTGCGCCTCGCCGAGCACCGCCTCCTCGGCGAGCACCACGGCGAGCCCCCCCTCCTCCTCGTGGACG
AGTGGGGGGAGGAGCTGGACGAGGCCCGCAGGCGGGCCGTCCTCGCCTACGCCCAGGCCCTGCCCCAGGCCATCCTGGCG
GGGCTGGAAGCCCCCCCGGGGGTGCCGGTATGCTCGGTGGTACGAGGGGTGGTCCTGTGCCCTGGCGCCTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recF | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
41.543 |
98.251 |
0.408 |