Detailed information
Bioinformatically predicted
Overview
| Name | rec2 | Type | Machinery gene |
| Locus tag | OR614_RS05085 | Genome accession | NZ_CP112896 |
| Coordinates | 1061814..1064207 (-) | Length | 797 a.a. |
| NCBI ID | WP_164905894.1 | Uniprot ID | - |
| Organism | Pasteurella multocida strain PF18 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1020697..1066535 | 1061814..1064207 | within | 0 |
Gene organization within MGE regions
Location: 1020697..1066535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OR614_RS04835 (OR614_04835) | - | 1020697..1022109 (-) | 1413 | WP_076090519.1 | type II and III secretion system protein family protein | - |
| OR614_RS04840 (OR614_04840) | - | 1022106..1022918 (-) | 813 | WP_010906886.1 | SAF domain-containing protein | - |
| OR614_RS04845 (OR614_04845) | - | 1022961..1023353 (-) | 393 | WP_076090521.1 | prepilin peptidase | - |
| OR614_RS04850 (OR614_04850) | - | 1023418..1023600 (-) | 183 | WP_076090523.1 | Flp family type IVb pilin | - |
| OR614_RS04855 (OR614_04855) | - | 1023701..1023925 (-) | 225 | WP_010906888.1 | Flp family type IVb pilin | - |
| OR614_RS04860 (OR614_04860) | - | 1025090..1026112 (-) | 1023 | WP_015981969.1 | site-specific integrase | - |
| OR614_RS04865 (OR614_04865) | - | 1026115..1026567 (-) | 453 | WP_078801975.1 | hypothetical protein | - |
| OR614_RS04870 (OR614_04870) | - | 1026567..1027142 (-) | 576 | WP_015981971.1 | phage repressor protein CI | - |
| OR614_RS04875 (OR614_04875) | - | 1027259..1027471 (+) | 213 | WP_078801976.1 | hypothetical protein | - |
| OR614_RS04880 (OR614_04880) | - | 1027543..1027785 (-) | 243 | WP_016533509.1 | hypothetical protein | - |
| OR614_RS04885 (OR614_04885) | - | 1027864..1028046 (+) | 183 | WP_016533510.1 | hypothetical protein | - |
| OR614_RS04890 (OR614_04890) | - | 1028039..1028374 (+) | 336 | WP_078801977.1 | hypothetical protein | - |
| OR614_RS04895 (OR614_04895) | - | 1028355..1028564 (+) | 210 | WP_078801978.1 | hypothetical protein | - |
| OR614_RS04900 (OR614_04900) | - | 1028579..1028830 (+) | 252 | WP_016570164.1 | hypothetical protein | - |
| OR614_RS04905 (OR614_04905) | - | 1028836..1029105 (+) | 270 | WP_005725397.1 | hypothetical protein | - |
| OR614_RS04910 (OR614_04910) | - | 1029135..1031528 (+) | 2394 | WP_266200003.1 | replication endonuclease | - |
| OR614_RS04915 (OR614_04915) | - | 1031542..1031793 (+) | 252 | WP_016533340.1 | hypothetical protein | - |
| OR614_RS04920 (OR614_04920) | - | 1031796..1032062 (+) | 267 | WP_266200004.1 | hypothetical protein | - |
| OR614_RS04925 (OR614_04925) | - | 1032031..1032567 (+) | 537 | WP_016533342.1 | phage N-6-adenine-methyltransferase | - |
| OR614_RS04930 (OR614_04930) | - | 1032664..1032939 (-) | 276 | WP_005725620.1 | ogr/Delta-like zinc finger family protein | - |
| OR614_RS04935 (OR614_04935) | - | 1033006..1034046 (-) | 1041 | WP_016570163.1 | phage portal protein | - |
| OR614_RS04940 (OR614_04940) | - | 1034051..1035859 (-) | 1809 | WP_266200005.1 | terminase ATPase subunit family protein | - |
| OR614_RS04945 (OR614_04945) | - | 1036064..1036948 (+) | 885 | WP_016533333.1 | GPO family capsid scaffolding protein | - |
| OR614_RS04950 (OR614_04950) | - | 1036953..1037981 (+) | 1029 | WP_016533334.1 | phage major capsid protein, P2 family | - |
| OR614_RS04955 (OR614_04955) | - | 1037988..1038860 (+) | 873 | WP_266200006.1 | terminase endonuclease subunit | - |
| OR614_RS04960 (OR614_04960) | - | 1038833..1039285 (+) | 453 | WP_016533336.1 | head completion/stabilization protein | - |
| OR614_RS04965 (OR614_04965) | - | 1039282..1039815 (+) | 534 | WP_016533337.1 | phage tail protein | - |
| OR614_RS04970 (OR614_04970) | - | 1039812..1040501 (+) | 690 | WP_016570162.1 | hypothetical protein | - |
| OR614_RS04975 (OR614_04975) | - | 1040520..1041650 (+) | 1131 | WP_016533243.1 | DUF2586 domain-containing protein | - |
| OR614_RS04980 (OR614_04980) | - | 1041655..1042107 (+) | 453 | WP_016533244.1 | DUF2597 family protein | - |
| OR614_RS04985 (OR614_04985) | - | 1042187..1042399 (+) | 213 | WP_016533245.1 | phage holin | - |
| OR614_RS04990 (OR614_04990) | - | 1042386..1042937 (+) | 552 | WP_015981996.1 | lysozyme | - |
| OR614_RS04995 (OR614_04995) | - | 1042934..1043320 (+) | 387 | WP_016533246.1 | hypothetical protein | - |
| OR614_RS12395 | lysC | 1043226..1043447 (+) | 222 | WP_369678675.1 | Rz1-like lysis system protein LysC | - |
| OR614_RS05000 (OR614_05000) | - | 1043454..1043762 (+) | 309 | WP_015981998.1 | putative phage tail assembly chaperone | - |
| OR614_RS12400 | - | 1043819..1043941 (+) | 123 | WP_016533247.1 | DUF6890 family protein | - |
| OR614_RS05005 (OR614_05005) | - | 1043955..1046078 (+) | 2124 | WP_016533248.1 | phage tail tape measure protein | - |
| OR614_RS05010 (OR614_05010) | - | 1046082..1046420 (+) | 339 | WP_005725175.1 | DUF2590 family protein | - |
| OR614_RS05015 (OR614_05015) | - | 1046413..1047579 (+) | 1167 | WP_016533249.1 | baseplate J/gp47 family protein | - |
| OR614_RS05020 (OR614_05020) | - | 1047579..1048172 (+) | 594 | WP_230491938.1 | phage tail protein | - |
| OR614_RS05025 (OR614_05025) | - | 1048210..1051065 (+) | 2856 | WP_266200008.1 | phage tail protein | - |
| OR614_RS05030 (OR614_05030) | - | 1051076..1051840 (+) | 765 | WP_016533395.1 | hypothetical protein | - |
| OR614_RS05035 (OR614_05035) | - | 1051827..1052399 (+) | 573 | WP_071523714.1 | hypothetical protein | - |
| OR614_RS05040 (OR614_05040) | - | 1052396..1053997 (+) | 1602 | WP_266200009.1 | hypothetical protein | - |
| OR614_RS05055 (OR614_05055) | pgsA | 1055519..1056076 (-) | 558 | WP_005751628.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| OR614_RS05060 (OR614_05060) | uvrC | 1056172..1058007 (-) | 1836 | WP_078737851.1 | excinuclease ABC subunit UvrC | - |
| OR614_RS05065 (OR614_05065) | kdsB | 1058032..1058808 (-) | 777 | WP_076090527.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| OR614_RS05070 (OR614_05070) | - | 1058810..1058992 (-) | 183 | WP_076090529.1 | Trm112 family protein | - |
| OR614_RS05075 (OR614_05075) | lpxK | 1059004..1059981 (-) | 978 | WP_076090531.1 | tetraacyldisaccharide 4'-kinase | - |
| OR614_RS05080 (OR614_05080) | msbA | 1060013..1061761 (-) | 1749 | WP_078737852.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| OR614_RS05085 (OR614_05085) | rec2 | 1061814..1064207 (-) | 2394 | WP_164905894.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| OR614_RS05090 (OR614_05090) | dksA | 1064504..1064941 (+) | 438 | WP_005716860.1 | RNA polymerase-binding protein DksA | - |
| OR614_RS05095 (OR614_05095) | pcnB | 1065030..1066535 (+) | 1506 | WP_016533715.1 | polynucleotide adenylyltransferase PcnB | - |
Sequence
Protein
Download Length: 797 a.a. Molecular weight: 91190.58 Da Isoelectric Point: 9.8258
>NTDB_id=758798 OR614_RS05085 WP_164905894.1 1061814..1064207(-) (rec2) [Pasteurella multocida strain PF18]
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
Nucleotide
Download Length: 2394 bp
>NTDB_id=758798 OR614_RS05085 WP_164905894.1 1061814..1064207(-) (rec2) [Pasteurella multocida strain PF18]
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rec2 | Haemophilus influenzae Rd KW20 |
51.003 |
100 |
0.511 |