Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   OQ382_RS08520 Genome accession   NZ_CP111117
Coordinates   1804671..1805948 (-) Length   425 a.a.
NCBI ID   WP_033611115.1    Uniprot ID   -
Organism   Lactiplantibacillus paraplantarum strain RX-8     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1799671..1810948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OQ382_RS08515 - 1802922..1804631 (-) 1710 WP_033611116.1 proline--tRNA ligase -
  OQ382_RS08520 eeP 1804671..1805948 (-) 1278 WP_033611115.1 RIP metalloprotease RseP Regulator
  OQ382_RS08525 - 1805986..1806771 (-) 786 WP_033611114.1 phosphatidate cytidylyltransferase -
  OQ382_RS08530 - 1806787..1807566 (-) 780 WP_033611113.1 isoprenyl transferase -
  OQ382_RS08535 frr 1807686..1808249 (-) 564 WP_003640736.1 ribosome recycling factor -
  OQ382_RS08540 pyrH 1808251..1808973 (-) 723 WP_021730795.1 UMP kinase -
  OQ382_RS08545 tsf 1809173..1810051 (-) 879 WP_021730794.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45965.56 Da        Isoelectric Point: 9.9189

>NTDB_id=758006 OQ382_RS08520 WP_033611115.1 1804671..1805948(-) (eeP) [Lactiplantibacillus paraplantarum strain RX-8]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGQDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDETEVKRYPVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTAHSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQQLKLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDSSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKILLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=758006 OQ382_RS08520 WP_033611115.1 1804671..1805948(-) (eeP) [Lactiplantibacillus paraplantarum strain RX-8]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGTATCTTGGTCATCGTCCATGAGTTTGGGCACTTTTACTTCGC
CAAAAAGGCTGGGATTTTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CCTATACGTTACGGTTTTTACCAATTGGGGGCTACGTGCGGATGGCAGGTGTCGCCGATGATGAGGATGAAGAACTCAAA
CCAGGGACACCAGTAAGCTTGCAAGTTGGTCAGGATGGGATTGTTCATTCGATCAATGCTAGTAAAAAAACAACGTTGTT
CAATGGAATTCCGCTATCGGTAACGGCCACTGATCTAGAAAAAGAACTCTGGATCGAAGGTTACGAAAATGGTGACGAAA
CTGAAGTGAAACGATATCCTGTCGATCATGATGCAACCATTGTGGAAAGTGACGGGACTGAAGTTCAAATTGCCCCGGTC
GACGTTCAGTTTCAATCAGCCAAACTTTGGCAACGCATGTTGACCAATTTTGCTGGTCCGATGAATAATTTCATCCTGGC
CATCATTACCTTTGCTATTTTAGCTTTTATGCAAGGGGGGGTCACCAGTACGACGACCCACGTTGCAGCGACAACGGCTC
ACTCAGTCGCACGACAAGCTGGCATTCAAAAGGGTGATCAGATTGTGGCCGTAAATGGTAAAAAAATGACGAGTGCGCAA
TCAATTTCGTTATTGATTCAGGACAGCCCCAAGCAACAATTAAAGTTGACCATCAAACGGGCGGGACAGACTAAAAAAAT
TGCAGTCACGCCCGCTGCTAAGACGGTTTCTGGTAATCGGATTGGTCAAATTGGGGTCCAATGGGCCACTAAGACGGATT
CGAGTCTAGGTGCTAAGTTGGCATATGGGTTTACTGGCTCGTGGGGAATCACGAAGCAGATTTTTCAAGTGCTCGGGCGG
ATGGTTACCCATGGTTTTAGTTTGAATGATTTAGGGGGGCCCGTGGCAATCTTTGCAACGACTTCTCAAGCGGCTAAATC
TGGTGTGCGCACTGTGATTTACTTGCTGGCTGTGTTATCGATCAACCTCGGAATTGTCAATTTATTGCCAATTCCAGCCC
TTGATGGTGGTAAAATATTATTAAACATTGTTGAAGGCATTCGAGGTAAACCACTGCGAGTGGAAACGGAAAGTGTTATT
ACCTTGATTGGATTTGGCCTTTTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAACGGTATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(211-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.299

100

0.496
  eeP Streptococcus thermophilus LMG 18311

49.299

100

0.496