Detailed information NTG0757613

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: OQE53_RS16625
• Genome accession: NZ_CP111072
• Coordinates: 3364328..3365491 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain YFI-E109
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3359328..3370491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OQE53_RS16595	-	3359592..3360011 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
OQE53_RS16600	comFC	3360085..3360774 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
OQE53_RS16605	-	3360780..3361064 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
OQE53_RS16610	comFA	3361122..3362507 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
OQE53_RS16615	-	3362616..3363464 (-)	849	WP_032876160.1	DegV family protein	-
OQE53_RS16620	degU	3363562..3364251 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
OQE53_RS16625	degS	3364328..3365491 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
OQE53_RS16630	-	3365714..3366361 (+)	648	WP_007614107.1	YigZ family protein	-
OQE53_RS16635	-	3366366..3367547 (+)	1182	WP_032876157.1	LCP family protein	-
OQE53_RS16640	-	3367646..3368722 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
OQE53_RS16645	tuaH	3368855..3370051 (-)	1197	WP_032876154.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=757613 OQE53_RS16625 WP_007407484.1 3364328..3365491(-) (degS) [Bacillus velezensis strain YFI-E109]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=757613 OQE53_RS16625 WP_007407484.1 3364328..3365491(-) (degS) [Bacillus velezensis strain YFI-E109]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951