Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KI243_RS30685 Genome accession   NZ_AP021904
Coordinates   6909551..6909958 (-) Length   135 a.a.
NCBI ID   WP_017124841.1    Uniprot ID   A0A7Y8CDB7
Organism   Pseudomonas sp. Ost2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6904551..6914958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI243_RS30670 (PHLH7_60440) - 6906527..6908584 (-) 2058 WP_017124838.1 methyl-accepting chemotaxis protein -
  KI243_RS30675 (PHLH7_60450) - 6908588..6909127 (-) 540 WP_103032753.1 chemotaxis protein CheW -
  KI243_RS30680 (PHLH7_60460) pilH 6909140..6909505 (-) 366 WP_042934830.1 twitching motility response regulator PilH -
  KI243_RS30685 (PHLH7_60470) pilG 6909551..6909958 (-) 408 WP_017124841.1 twitching motility response regulator PilG Regulator
  KI243_RS30690 (PHLH7_60480) gshB 6910208..6911161 (+) 954 WP_042934799.1 glutathione synthase -
  KI243_RS30695 (PHLH7_60490) - 6911239..6912138 (+) 900 WP_017124843.1 energy transducer TonB -
  KI243_RS30700 (PHLH7_60500) - 6912278..6912847 (+) 570 WP_017124844.1 YqgE/AlgH family protein -
  KI243_RS30705 (PHLH7_60510) ruvX 6912847..6913287 (+) 441 WP_103032754.1 Holliday junction resolvase RuvX -
  KI243_RS30710 (PHLH7_60520) pyrR 6913356..6913862 (+) 507 WP_212810242.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KI243_RS30715 (PHLH7_60530) - 6913886..6914890 (+) 1005 WP_103032755.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14806.24 Da        Isoelectric Point: 7.4358

>NTDB_id=75727 KI243_RS30685 WP_017124841.1 6909551..6909958(-) (pilG) [Pseudomonas sp. Ost2]
MEQHSTALKVMVIDDSKTIRRTAETLLKHVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDRFLTKPFSKEELLDAIKAHVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=75727 KI243_RS30685 WP_017124841.1 6909551..6909958(-) (pilG) [Pseudomonas sp. Ost2]
ATGGAACAGCATTCCACAGCCTTGAAAGTCATGGTCATCGATGACTCCAAGACGATTCGTCGCACGGCCGAAACGCTGCT
CAAGCATGTCGGTTGCGAAGTCATCACGGCCATCGACGGTTTCGATGCGCTGGCCAAGATTGCCGATCATCATCCGGGCA
TCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGTTATCAGACCTGCGCCCTGATCAAGAACAACAGTGCGTTCAAG
TCGACGCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCGCTT
CTTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTGGATGCGATCAAGGCCCATGTGCCGGGATTCGCGGCAGTGGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8CDB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

40.476

93.333

0.378

Multiple sequence alignment