Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   OHI04_RS11415 Genome accession   NZ_CP110849
Coordinates   2265184..2266470 (-) Length   428 a.a.
NCBI ID   WP_033900700.1    Uniprot ID   A0A4S2TCP0
Organism   Lactococcus lactis strain VHProbi V60     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2260184..2271470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHI04_RS11400 (OHI04_11405) - 2261375..2261911 (-) 537 WP_039116464.1 hypothetical protein -
  OHI04_RS11405 (OHI04_11410) - 2261917..2263248 (-) 1332 WP_039116467.1 NAD(P)/FAD-dependent oxidoreductase -
  OHI04_RS11410 (OHI04_11415) - 2263264..2265114 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  OHI04_RS11415 (OHI04_11420) eeP 2265184..2266470 (-) 1287 WP_033900700.1 RIP metalloprotease RseP Regulator
  OHI04_RS11420 (OHI04_11425) - 2266489..2267292 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  OHI04_RS11425 (OHI04_11430) - 2267292..2268026 (-) 735 WP_003130589.1 isoprenyl transferase -
  OHI04_RS11430 (OHI04_11435) yajC 2268400..2268732 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  OHI04_RS11435 (OHI04_11440) - 2268827..2269525 (-) 699 WP_039116470.1 DNA alkylation repair protein -
  OHI04_RS11440 (OHI04_11445) rlmH 2269544..2270023 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46383.91 Da        Isoelectric Point: 6.5147

>NTDB_id=756638 OHI04_RS11415 WP_033900700.1 2265184..2266470(-) (eeP) [Lactococcus lactis strain VHProbi V60]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=756638 OHI04_RS11415 WP_033900700.1 2265184..2266470(-) (eeP) [Lactococcus lactis strain VHProbi V60]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATAATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGTCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4S2TCP0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57