Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   OPU65_RS00965 Genome accession   NZ_CP110812
Coordinates   163754..164554 (+) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain CamBx3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 158754..169554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPU65_RS00945 (OPU65_00945) - 158780..159625 (+) 846 WP_265626369.1 TlyA family RNA methyltransferase -
  OPU65_RS00950 (OPU65_00950) ahrC 159789..160238 (+) 450 WP_020452129.1 transcriptional regulator AhrC/ArgR -
  OPU65_RS00955 (OPU65_00955) recN 160270..162000 (+) 1731 WP_243943194.1 DNA repair protein RecN Machinery gene
  OPU65_RS00960 (OPU65_00960) spoIVB 162148..163464 (+) 1317 WP_265626371.1 SpoIVB peptidase -
  OPU65_RS00965 (OPU65_00965) spo0A 163754..164554 (+) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  OPU65_RS00970 (OPU65_00970) - 164902..165102 (+) 201 WP_265627931.1 hypothetical protein -
  OPU65_RS00975 (OPU65_00975) - 165035..165193 (+) 159 WP_265626373.1 LCI fold-containing protein -
  OPU65_RS00980 (OPU65_00980) - 165320..165889 (+) 570 WP_265626375.1 serine O-acetyltransferase -
  OPU65_RS00985 (OPU65_00985) - 166408..166728 (+) 321 WP_265626377.1 hypothetical protein -
  OPU65_RS00990 (OPU65_00990) - 166764..167384 (+) 621 WP_265626378.1 N-acetylmuramoyl-L-alanine amidase -
  OPU65_RS00995 (OPU65_00995) - 167519..168244 (+) 726 WP_243943204.1 glycerophosphodiester phosphodiesterase -
  OPU65_RS01000 (OPU65_01000) - 168355..168609 (-) 255 WP_152847012.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=756340 OPU65_RS00965 WP_003183361.1 163754..164554(+) (spo0A) [Bacillus paralicheniformis strain CamBx3]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=756340 OPU65_RS00965 WP_003183361.1 163754..164554(+) (spo0A) [Bacillus paralicheniformis strain CamBx3]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGGCAAAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCGTTGTTTAAAGACAAGGAGCCCGATGTGCTTG
TGCTGGATATTATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACAGCGTTCGGCCAGGAAGACGTGACGAAAAAAGCTGTAGATTTGGGAGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAACTTAGTCGGCCATATCCGCCAGGTCAGCGGAAACGGGTCTCAATTGACACACCGCGCCC
CGTCTTCTCAAAGCAGTGTGCTTCGGCCGCAGCCGGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAGATCGGTGTGCCCGCTCATATAAAAGGCTATTTATACTTAAGGGAAGCCATCTCCATGGTGTATAACGACATTGA
ACTGCTCGGAAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACGGCAAGCCGCGTCGAACGGG
CAATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925