Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | OP858_RS06210 | Genome accession | NZ_CP110784 |
| Coordinates | 1256165..1257139 (+) | Length | 324 a.a. |
| NCBI ID | WP_002453334.1 | Uniprot ID | - |
| Organism | Staphylococcus capitis strain CCSM0123 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1251165..1262139
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OP858_RS06175 (OP858_06175) | rpmG | 1251678..1251827 (+) | 150 | WP_002433802.1 | 50S ribosomal protein L33 | - |
| OP858_RS06180 (OP858_06180) | - | 1251976..1252527 (+) | 552 | WP_029625710.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| OP858_RS06185 (OP858_06185) | - | 1252528..1253991 (+) | 1464 | WP_002453338.1 | rhomboid family intramembrane serine protease | - |
| OP858_RS06190 (OP858_06190) | - | 1253972..1254175 (+) | 204 | WP_002453337.1 | YqgQ family protein | - |
| OP858_RS06195 (OP858_06195) | - | 1254172..1255158 (+) | 987 | WP_267263329.1 | ROK family glucokinase | - |
| OP858_RS06200 (OP858_06200) | - | 1255158..1255484 (+) | 327 | WP_002433945.1 | MTH1187 family thiamine-binding protein | - |
| OP858_RS06205 (OP858_06205) | - | 1255484..1256107 (+) | 624 | WP_002453335.1 | MBL fold metallo-hydrolase | - |
| OP858_RS06210 (OP858_06210) | comGA | 1256165..1257139 (+) | 975 | WP_002453334.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| OP858_RS06215 (OP858_06215) | comGB | 1257111..1258180 (+) | 1070 | Protein_1177 | competence type IV pilus assembly protein ComGB | - |
| OP858_RS06220 (OP858_06220) | comGC | 1258199..1258510 (+) | 312 | WP_029625707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| OP858_RS06225 (OP858_06225) | comGD | 1258500..1258937 (+) | 438 | WP_410482995.1 | competence type IV pilus minor pilin ComGD | - |
| OP858_RS06230 (OP858_06230) | - | 1259026..1259223 (+) | 198 | WP_267263331.1 | hypothetical protein | - |
| OP858_RS06235 (OP858_06235) | - | 1259213..1259548 (+) | 336 | WP_231138593.1 | ComGF family competence protein | - |
| OP858_RS06245 (OP858_06245) | - | 1259801..1260310 (+) | 510 | WP_029625706.1 | shikimate kinase | - |
| OP858_RS06250 (OP858_06250) | gcvT | 1260519..1261610 (+) | 1092 | WP_016898186.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37118.93 Da Isoelectric Point: 7.7163
>NTDB_id=756098 OP858_RS06210 WP_002453334.1 1256165..1257139(+) (comGA) [Staphylococcus capitis strain CCSM0123]
MKMLFQEIVNYAIKHTASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAYQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
MKMLFQEIVNYAIKHTASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAYQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=756098 OP858_RS06210 WP_002453334.1 1256165..1257139(+) (comGA) [Staphylococcus capitis strain CCSM0123]
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACACTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGCGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCTATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTTACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTTTCTAAGGAAGGAGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACACTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGCGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCTATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTTACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTTTCTAAGGAAGGAGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.588 |
99.691 |
0.704 |
| comGA | Staphylococcus aureus N315 |
70.588 |
99.691 |
0.704 |