Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | OP858_RS03915 | Genome accession | NZ_CP110784 |
| Coordinates | 812020..812415 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis strain CCSM0123 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 807020..817415
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OP858_RS03885 (OP858_03885) | atpD | 807238..808650 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| OP858_RS03890 (OP858_03890) | - | 808670..809074 (+) | 405 | WP_002453706.1 | F0F1 ATP synthase subunit epsilon | - |
| OP858_RS03895 (OP858_03895) | - | 809215..809448 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| OP858_RS03900 (OP858_03900) | murA | 809558..810823 (+) | 1266 | WP_002453704.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| OP858_RS03905 (OP858_03905) | fabZ | 810868..811305 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| OP858_RS03910 (OP858_03910) | - | 811386..811829 (-) | 444 | WP_002453703.1 | YwpF-like family protein | - |
| OP858_RS03915 (OP858_03915) | ssb | 812020..812415 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| OP858_RS03920 (OP858_03920) | - | 812810..813535 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| OP858_RS03925 (OP858_03925) | tenA | 813831..814526 (+) | 696 | WP_002453701.1 | thiaminase II | - |
| OP858_RS03930 (OP858_03930) | thiD | 814513..815334 (+) | 822 | WP_016898666.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| OP858_RS03935 (OP858_03935) | thiM | 815327..816115 (+) | 789 | WP_267263593.1 | hydroxyethylthiazole kinase | - |
| OP858_RS03940 (OP858_03940) | thiE | 816122..816760 (+) | 639 | WP_186334660.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=756086 OP858_RS03915 WP_002435780.1 812020..812415(+) (ssb) [Staphylococcus capitis strain CCSM0123]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=756086 OP858_RS03915 WP_002435780.1 812020..812415(+) (ssb) [Staphylococcus capitis strain CCSM0123]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATTTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |