Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   BBP27_RS09830 Genome accession   NZ_CP110721
Coordinates   2061984..2062679 (+) Length   231 a.a.
NCBI ID   WP_188211551.1    Uniprot ID   -
Organism   Neisseria sp. RH3002v2g     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2056984..2067679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBP27_RS09810 - 2057889..2058668 (+) 780 WP_003684015.1 exodeoxyribonuclease III -
  BBP27_RS09815 - 2058655..2058999 (+) 345 WP_070608462.1 hypothetical protein -
  BBP27_RS09820 - 2059010..2059543 (+) 534 WP_188211549.1 alpha/beta hydrolase -
  BBP27_RS09825 - 2059703..2061814 (+) 2112 WP_188211550.1 TonB-dependent receptor -
  BBP27_RS09830 dsbA2 2061984..2062679 (+) 696 WP_188211551.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  BBP27_RS09835 ffh 2062847..2064217 (-) 1371 WP_003684000.1 signal recognition particle protein -
  BBP27_RS09840 ccsA 2064400..2065212 (+) 813 WP_003749434.1 cytochrome c biogenesis protein CcsA -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25344.88 Da        Isoelectric Point: 5.3625

>NTDB_id=756019 BBP27_RS09830 WP_188211551.1 2061984..2062679(+) (dsbA2) [Neisseria sp. RH3002v2g]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKMFKDDTYLRREHVIWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=756019 BBP27_RS09830 WP_188211551.1 2061984..2062679(+) (dsbA2) [Neisseria sp. RH3002v2g]
ATGAAACTGAAAACTTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTGT
TGTCCACTCCTATCCCGCAACAGCAGGCCGGCAAAGTCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCA
CATTTGGAACCGGTTTTGAGCGAACACACTAAAATGTTCAAAGACGATACCTATCTGCGTCGCGAGCATGTGATTTGGGG
CGACGAAATGAAACCTTTGGCTCGTTTGGCCGCCGCAGTGGAAATGGCTGGCGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGTTGTCTGAGCAAACCGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAATTGACCAATAA
ATTTCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAACTGGTGGACAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.244

92.208

0.887
  dsbA1 Neisseria meningitidis MC58

71.674

100

0.723