Detailed information NTG0075599

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KI235_RS21740
• Genome accession: NZ_AP021900
• Coordinates: 4937626..4939872 (-)
• Length: 748 a.a.
• NCBI ID: WP_212795297.1
• Uniprot ID: A0AAD1GTA6
• Organism: Pseudomonas sp. St386
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4932626..4944872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI235_RS21705 (PHLH3_43350)	murB	4933009..4934028 (-)	1020	WP_212795296.1	UDP-N-acetylmuramate dehydrogenase	-
KI235_RS21710 (PHLH3_43360)	-	4934025..4934489 (-)	465	WP_013694001.1	low molecular weight protein-tyrosine-phosphatase	-
KI235_RS21715 (PHLH3_43370)	kdsB	4934489..4935253 (-)	765	WP_003204286.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KI235_RS21720 (PHLH3_43380)	-	4935250..4935435 (-)	186	WP_003179363.1	Trm112 family protein	-
KI235_RS21725 (PHLH3_43390)	lpxK	4935459..4936469 (-)	1011	WP_003204290.1	tetraacyldisaccharide 4'-kinase	-
KI235_RS21730 (PHLH3_43400)	-	4936469..4936897 (-)	429	WP_013694002.1	biopolymer transporter ExbD	-
KI235_RS21735 (PHLH3_43410)	exbB	4936894..4937529 (-)	636	WP_003204294.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
KI235_RS21740 (PHLH3_43420)	comA	4937626..4939872 (-)	2247	WP_212795297.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KI235_RS21745 (PHLH3_43430)	-	4940017..4940532 (+)	516	WP_003204298.1	DUF2062 domain-containing protein	-
KI235_RS21750 (PHLH3_43440)	-	4940619..4941398 (-)	780	WP_003204300.1	ABC transporter permease	-
KI235_RS21755 (PHLH3_43450)	-	4941401..4942333 (-)	933	WP_003204301.1	ABC transporter ATP-binding protein	-
KI235_RS21760 (PHLH3_43460)	-	4942470..4943093 (-)	624	WP_003204303.1	glutathione S-transferase	-
KI235_RS21765 (PHLH3_43470)	-	4943139..4943798 (-)	660	WP_003204305.1	transglutaminase family protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81042.33 Da
• Isoelectric Point: 9.3794

>NTDB_id=75599 KI235_RS21740 WP_212795297.1 4937626..4939872(-) (comA) [Pseudomonas sp. St386]
MRTGLVALALGLLAPIFLPALPPIWLITAMPVLALMVLPFRTYPLGFFLFGLAWACLSAQCALDDRLPIALDGETRWVEG
RVIGLPQQGEGVMRFELADVHSRRTRLPTAMRLAWFGGPSVNSGERWRLAVKLKRPSGLLNPHGFDYAAWLLSRGIGATG
TIKDGHLLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPVGLAWLPWACGLAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPLAL
LGTALLPVPLMGEGLLWIAGGLLDLLFKGLALVAGRMPAWVPAAVPPWALGIAAFGAFLLLLPKGVPLRVLGWPMVLLMV
FPPQEHLPQGHAEIWQLDVGQGLAVLVRTRRHALLYDAGPRFGEADAGERVVLPTLRKLGVRRLDLMLLSHADADHAGGA
RAVRNGLPTLEVISGDPDALPAELLAGPCDSGRRWEWDGVGFELWRWASAVESNQKSCVLVVEAGGERLLLTGDIDTPAE
RALLDEALAVPIQWLAAPHHGSRSSSSMALLSRLKPHSVLISRGQGNAFGHPHPQVMARYRRSGLAIYDSAEQGAIRLLL
GAFEVPHTEAGHRRYWRDPPAVGPPGQY

Nucleotide

• Length: 2247 bp

>NTDB_id=75599 KI235_RS21740 WP_212795297.1 4937626..4939872(-) (comA) [Pseudomonas sp. St386]
ATGCGCACAGGGTTAGTCGCGCTTGCACTGGGGCTGTTGGCCCCGATTTTTTTGCCGGCACTGCCGCCGATATGGCTGAT
TACAGCCATGCCGGTGCTGGCGCTGATGGTGTTGCCGTTTCGAACCTACCCGCTGGGTTTTTTCCTGTTCGGGCTGGCCT
GGGCCTGCCTGTCGGCGCAGTGTGCGTTGGACGACCGGTTACCCATCGCGCTTGACGGCGAAACCCGCTGGGTCGAGGGT
CGAGTGATCGGTTTGCCGCAACAGGGCGAAGGCGTGATGCGCTTCGAACTGGCCGATGTCCATTCACGCCGTACCCGTCT
ACCGACGGCGATGCGTCTCGCCTGGTTCGGTGGTCCGTCGGTCAACAGCGGCGAACGATGGCGATTGGCGGTGAAACTCA
AGCGGCCCAGTGGGCTGCTGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGCTGAGCCGCGGCATCGGCGCGACCGGT
ACCATCAAGGATGGCCATCTCCTGCAAGCGGCCCGGGGGGCCTGGCGTGACGAGGTGCGCCAGGCGCTGGCACAGGTCGA
TGCCCACGGCCGCTCCGGTGCGCTGGCGGCTCTGGTGCTGGGCGACGGCGGCGGGCTGAGTCGCGAGGATTGGCAGGTGC
TGCAAGACACCGGCACCGTCCACTTGCTGGTGATCTCCGGGCAACACATCGGCCTGCTCGCCGGCCTGGTGTACCTGTTG
GTGGCCGGCGCGGCGCGTTATGGTCTTTGGCCGGTGGGTCTGGCCTGGTTGCCTTGGGCCTGTGGGCTGGCCTTCTGTGC
CGCCCTGGGCTACGGCTTGCTCGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGCGCGATGATCGGCCTGGTGCTGCTGT
GGCGCTTGCGTTTCAAACAGCCAGATCCGTGGTGGGCATGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTT
GCCAGCTTGCGGCCGGGGTTCTGGTTGTCGTTTGCGGCCGTGGCCATATTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTCGCGCTCGGCCTGTGTCCGTTGTTGTTGATCGTGGGTT
TGCCGGTCAGCCTCAGCGGGCCGTTGGTGAACCTGCTCGCGGTGCCCTGGATCAGCCTGTTGGTATTGCCGCTGGCGCTG
CTTGGCACGGCATTGTTGCCGGTGCCGCTCATGGGCGAAGGCCTGCTGTGGATTGCCGGTGGGCTGCTCGATCTGCTGTT
CAAGGGGCTGGCACTGGTTGCCGGACGAATGCCGGCCTGGGTTCCTGCCGCAGTCCCGCCCTGGGCCTTGGGCATCGCCG
CCTTCGGTGCTTTTTTGCTGCTGTTGCCCAAAGGTGTGCCGCTACGTGTACTGGGGTGGCCGATGGTGTTGCTGATGGTT
TTTCCACCGCAAGAACACCTGCCGCAAGGGCACGCCGAGATCTGGCAACTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGGACCCGGCGGCACGCCCTGCTTTACGACGCCGGGCCGCGCTTTGGCGAGGCTGACGCGGGCGAGCGGGTCGTCCTGC
CGACCTTGCGCAAACTGGGTGTGCGCCGCTTGGACCTGATGTTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGTGCC
CGCGCCGTGCGCAATGGGCTGCCGACGCTGGAAGTGATCAGCGGCGATCCGGACGCGCTGCCCGCCGAACTGCTGGCCGG
GCCTTGCGACAGTGGCAGGCGCTGGGAATGGGACGGGGTCGGGTTCGAACTGTGGCGGTGGGCCTCTGCCGTCGAGAGCA
ACCAGAAGTCCTGTGTCTTGGTGGTGGAGGCCGGCGGTGAACGCCTGCTGCTGACCGGCGATATCGACACCCCTGCCGAG
CGCGCCTTGCTCGACGAGGCCCTGGCGGTGCCGATCCAGTGGCTGGCCGCGCCGCATCACGGCAGTCGCAGTTCGTCGTC
GATGGCGTTGCTGTCGCGTCTCAAGCCGCATTCGGTATTGATCTCCCGAGGGCAGGGCAATGCGTTCGGCCACCCTCATC
CCCAGGTGATGGCCCGGTATCGGCGCTCGGGCCTGGCGATCTACGACAGTGCCGAGCAGGGCGCCATTCGTCTGCTACTG
GGGGCTTTCGAGGTGCCGCACACCGAGGCCGGGCACCGCCGCTACTGGCGTGATCCGCCCGCAGTCGGGCCACCGGGGCA
ATATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-165)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.453	95.722	0.588
comA	Ralstonia pseudosolanacearum GMI1000	32.038	100	0.364