Detailed information NTG0755983

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: BBP27_RS01670
• Genome accession: NZ_CP110721
• Coordinates: 358058..360151 (+)
• Length: 697 a.a.
• NCBI ID: WP_223168966.1
• Uniprot ID: -
• Organism: Neisseria sp. RH3002v2g
• Function: DNA processing; DNA transport into the cytoplasm (predicted from homology) DNA processing DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	341389..362244	358058..360151	within	0

Gene organization within MGE regions

Location: 341389..362244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBP27_RS01600	tssE	341389..341901 (-)	513	WP_188211790.1	type VI secretion system baseplate subunit TssE	-
BBP27_RS01605	-	341935..342750 (-)	816	WP_188211789.1	type VI secretion system accessory protein TagJ	-
BBP27_RS01610	-	342920..343402 (-)	483	WP_188211788.1	type VI secretion system tube protein Hcp	-
BBP27_RS01615	tssC	343482..344981 (-)	1500	WP_070850814.1	type VI secretion system contractile sheath large subunit	-
BBP27_RS01620	tssB	345013..345531 (-)	519	WP_070606732.1	type VI secretion system contractile sheath small subunit	-
BBP27_RS01625	tssA	345609..346667 (-)	1059	WP_188211787.1	type VI secretion system protein TssA	-
BBP27_RS01630	tagF	346672..347226 (-)	555	WP_188211786.1	type VI secretion system-associated protein TagF	-
BBP27_RS01635	-	347560..351705 (+)	4146	WP_265511146.1	DUF6531 domain-containing protein	-
BBP27_RS01640	-	351738..352289 (+)	552	WP_070849608.1	DUF4303 domain-containing protein	-
BBP27_RS01645	-	352463..355852 (+)	3390	WP_265511147.1	RHS repeat-associated core domain-containing protein	-
BBP27_RS01650	-	355878..356228 (+)	351	WP_265511148.1	Imm10 family immunity protein	-
BBP27_RS01655	-	356342..356857 (+)	516	WP_265511149.1	hypothetical protein	-
BBP27_RS01660	-	357280..357696 (+)	417	WP_188212207.1	CTP synthase	-
BBP27_RS01665	-	357910..358032 (-)	123	WP_265511150.1	hypothetical protein	-
BBP27_RS01670	comA	358058..360151 (+)	2094	WP_223168966.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BBP27_RS01675	-	360570..361190 (+)	621	WP_188212205.1	phosphoribosylanthranilate isomerase	-
BBP27_RS01680	-	361227..361829 (+)	603	WP_188212204.1	DNA glycosylase	-
BBP27_RS01685	-	361834..362244 (+)	411	WP_188212203.1	hypothetical protein	-

Sequence

Protein

• Length: 697 a.a.
• Molecular weight: 76008.48 Da
• Isoelectric Point: 9.8362

>NTDB_id=755983 BBP27_RS01670 WP_223168966.1 358058..360151(+) (comA) [Neisseria sp. RH3002v2g]
MAWLALAACMGMAFGVWRTGLVLAGQWPVGEVAAKVLTIEVADMPRDDGRRVQFAARAWDERGQAFDLMLSDYQRRDWMV
GSRWSVSARVKPVIGEVNVRGLNRETWALANGIDGMGTLGRDRKLVRQGGAFGLANMRDAVSRSWQGTADKYPEFSDGIG
LMRALSIGEQSALRPPLWQAFRPLGLTHLVSISGLHVTMVAVLFAWIIKRIFRYLPWIPAQPRVWILAGGVAGALFYALL
AGFSVPTQRSVLMLAAFAWAWWRGSGGSGWTAWWQALAVVLLLDPLAVLGVGTWLSFGLVAALIWASSGRLKESGWRLAV
RGQWAATVLSVVLLGYLFASLPLFSPLVNALAIPWFSWVLTPLALLGSVFPFELVQLVAAFLAEYTLRGLVWLATVSPEF
AVAAAPVPLLVLAMMAALLLLLPKGMGLKPWACLVLLGFVFYRPAKLEEGVARVTVMDAGQGLSVLIQTRNRNLLFDTGT
EQVAQTGIVPSLNAMGVRRLDSLILSHHDIDHDGGFQSVAAVGADKLLAGQPEFYPNAKFCQEDKWQWDGVDFELLRPSE
NTGKEDNDQSCVLRVVANGKALLITGDLGVKGEAGLIEKYGNALYSQVLVLGHHGSSTASSGSFLHTVSPQYAVASSGYA
NAYKHPTVAVQNRVRAHGITLLRTDLSGALVFVLGQDDVFRGRLKKDKFYWQKKPFE

Nucleotide

• Length: 2094 bp

>NTDB_id=755983 BBP27_RS01670 WP_223168966.1 358058..360151(+) (comA) [Neisseria sp. RH3002v2g]
ATGGCTTGGTTGGCTCTGGCCGCCTGCATGGGCATGGCGTTTGGTGTGTGGCGGACAGGGCTGGTGTTGGCCGGTCAATG
GCCTGTAGGGGAGGTGGCGGCTAAAGTTTTGACGATTGAAGTGGCGGATATGCCGCGTGATGATGGTCGGCGCGTGCAGT
TTGCGGCAAGGGCTTGGGATGAGCGCGGTCAGGCTTTTGATTTGATGTTGTCAGATTATCAGCGGCGCGATTGGATGGTG
GGTAGTCGGTGGTCTGTGTCGGCGCGGGTAAAGCCGGTGATTGGCGAAGTGAATGTGCGCGGTTTGAACCGTGAAACATG
GGCTTTGGCCAATGGTATCGACGGCATGGGTACTTTGGGGCGCGACAGGAAACTTGTGCGGCAAGGCGGTGCTTTCGGTT
TGGCTAATATGCGTGATGCGGTAAGCCGAAGTTGGCAGGGAACGGCGGACAAATATCCTGAGTTTTCAGACGGCATAGGG
TTGATGCGTGCTTTGAGTATTGGTGAGCAATCGGCGTTGCGACCGCCTTTGTGGCAGGCATTCCGGCCTTTGGGACTGAC
GCACTTGGTCAGTATTTCGGGCTTGCATGTAACGATGGTGGCGGTATTGTTTGCCTGGATAATCAAGCGAATTTTTCGTT
ATTTGCCGTGGATTCCGGCGCAACCGCGTGTGTGGATATTGGCCGGCGGTGTTGCCGGGGCTTTGTTTTATGCGCTTTTG
GCCGGTTTTTCTGTACCGACGCAACGCAGTGTGTTGATGTTGGCTGCGTTTGCGTGGGCATGGTGGCGCGGCAGTGGCGG
CTCGGGCTGGACGGCATGGTGGCAGGCTTTGGCCGTTGTTTTGTTGTTGGACCCGTTGGCCGTATTGGGCGTGGGAACGT
GGTTGTCTTTCGGTTTGGTTGCTGCTTTGATTTGGGCTTCATCAGGCCGTCTGAAAGAATCGGGCTGGCGTTTGGCTGTA
CGGGGGCAATGGGCGGCGACGGTATTGTCGGTGGTATTGCTGGGCTATTTGTTTGCTTCGTTACCTTTGTTCAGTCCCTT
GGTCAATGCGCTGGCTATTCCTTGGTTTTCTTGGGTATTGACGCCGTTGGCTTTGCTGGGTTCGGTTTTCCCGTTTGAAC
TTGTCCAGTTGGTAGCGGCATTTTTGGCGGAATATACTTTACGCGGTTTGGTATGGCTGGCTACGGTATCGCCTGAATTT
GCCGTCGCAGCGGCGCCTGTGCCTTTGCTAGTGTTGGCGATGATGGCGGCTTTGCTGTTATTGCTGCCTAAAGGAATGGG
CTTGAAACCTTGGGCATGTTTGGTTTTATTGGGTTTTGTGTTTTACCGTCCTGCCAAGTTGGAGGAGGGGGTAGCAAGAG
TTACCGTAATGGATGCAGGGCAAGGTTTGTCGGTGTTGATACAAACGCGTAACCGCAATCTTTTGTTTGATACGGGAACG
GAGCAAGTGGCGCAAACAGGTATTGTGCCGAGTTTGAACGCGATGGGTGTGCGCCGTTTGGACAGCCTGATTTTATCGCA
CCATGACATTGACCATGACGGCGGTTTTCAAAGTGTAGCGGCTGTCGGTGCCGATAAATTGCTTGCCGGACAACCTGAGT
TTTATCCGAATGCAAAGTTTTGCCAAGAAGACAAATGGCAATGGGACGGCGTAGATTTCGAGTTGCTCAGGCCGTCTGAA
AATACGGGTAAGGAAGATAACGATCAGAGCTGCGTATTGCGTGTCGTGGCAAACGGCAAAGCCTTGTTGATAACCGGCGA
TTTGGGCGTGAAGGGCGAGGCCGGTTTGATTGAGAAATACGGCAATGCGTTGTATAGCCAAGTGTTGGTATTGGGACATC
ACGGCAGCAGCACGGCTTCGTCAGGTAGCTTTTTACATACGGTTTCGCCGCAATATGCCGTGGCATCCAGCGGCTATGCC
AATGCCTACAAACATCCGACCGTTGCCGTGCAAAATCGTGTCCGCGCGCACGGCATTACTTTGTTGAGAACGGATTTGTC
AGGCGCATTGGTGTTTGTTTTAGGGCAAGACGATGTGTTCCGAGGCCGTCTGAAAAAGGACAAGTTTTATTGGCAGAAGA
AACCGTTTGAGTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (165-422)

• Metallo-beta-lactamase superfamily (Lactamase_B) (459-635)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Neisseria gonorrhoeae MS11	71.037	99.57	0.707
comA	Ralstonia pseudosolanacearum GMI1000	33.595	100	0.369