Detailed information NTG0755438

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OOT55_RS01180
• Genome accession: NZ_CP110629
• Coordinates: 274305..275681 (-)
• Length: 458 a.a.
• NCBI ID: WP_265367344.1
• Uniprot ID: -
• Organism: Marinimicrobium sp. C6131
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 269305..280681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OOT55_RS01170 (OOT55_01170)	-	269484..273860 (+)	4377	WP_265367342.1	pilus assembly protein	-
OOT55_RS01175 (OOT55_01175)	-	273878..274279 (+)	402	WP_265367343.1	type IV pilin protein	-
OOT55_RS01180 (OOT55_01180)	pilR	274305..275681 (-)	1377	WP_265367344.1	sigma-54-dependent transcriptional regulator	Regulator
OOT55_RS01185 (OOT55_01185)	-	275728..277335 (-)	1608	WP_265367345.1	sensor histidine kinase	-
OOT55_RS01190 (OOT55_01190)	-	277463..279088 (+)	1626	WP_265367346.1	NAD+ synthase	-
OOT55_RS01195 (OOT55_01195)	-	279177..280088 (-)	912	WP_265367347.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 50865.33 Da
• Isoelectric Point: 5.3627

>NTDB_id=755438 OOT55_RS01180 WP_265367344.1 274305..275681(-) (pilR) [Marinimicrobium sp. C6131]
MSNQRVLVIDDEPDIRELLNITLGRMGIEADCVENLTLAKERLKQSQYALCLTDMRLPDGNGLELVEFIQQEYPRLPVAV
ITAHGSIDAAIESMKAGAFDFVSKPVDLTALRKLVSSAIQSSQLPPMPLPAECPIIGQSKAIQHLIASIQKLARSQAPVY
ISGESGVGKELVARSIHKLGPRADGEFVAVNCGAIPRELMESEFFGHKKGSFTGAHQDKAGLFQVAEGGTLFLDEVADLP
LDMQVKLLRAIQEKAVRPVGGQNEISTDVRILCATHKALDQEVLQGRFRQDLFYRLNVIQLRVPPLRERREDIAMLARHI
LEQLAREVNFPTPQLSQPAMKQLCEYHFPGNVRELENILERAFTLCESQVIDPADLHLPDNTDPMGNGMEPANDGAGNHV
ARCAEYPSLDHYLQEVEKDILCNALEQAKWNKTQAAKNLGISFRSLRYRLQKLGLDDD

Nucleotide

• Length: 1377 bp

>NTDB_id=755438 OOT55_RS01180 WP_265367344.1 274305..275681(-) (pilR) [Marinimicrobium sp. C6131]
ATGAGCAATCAACGCGTTCTGGTTATTGATGACGAGCCCGATATTCGCGAGCTGCTGAATATCACCCTCGGGCGGATGGG
CATTGAGGCCGACTGTGTGGAGAACCTGACGTTGGCCAAGGAGCGTCTGAAGCAATCCCAGTACGCCCTGTGCCTGACAG
ACATGCGCCTGCCTGACGGGAACGGTCTGGAGCTGGTGGAATTCATTCAGCAGGAATATCCCCGGTTGCCGGTCGCCGTG
ATTACGGCCCACGGCAGTATCGATGCCGCCATCGAATCCATGAAAGCCGGCGCCTTTGACTTTGTGTCCAAGCCGGTCGA
TCTCACCGCATTACGCAAGCTGGTCAGCAGCGCCATCCAGTCCAGCCAGCTGCCGCCCATGCCGCTGCCGGCGGAGTGTC
CGATCATTGGCCAATCCAAAGCCATTCAGCATCTGATCGCCAGCATTCAGAAGCTGGCCCGTTCCCAGGCACCGGTGTAT
ATCTCGGGAGAATCCGGGGTGGGTAAGGAGCTGGTGGCCCGCTCCATCCATAAACTGGGACCGCGGGCCGACGGTGAGTT
CGTGGCGGTCAACTGTGGTGCCATTCCCCGGGAGTTGATGGAGAGCGAGTTTTTCGGTCACAAGAAAGGCAGCTTTACCG
GTGCCCACCAAGATAAGGCGGGGCTGTTTCAGGTTGCCGAAGGCGGCACACTGTTCCTGGACGAGGTGGCCGACCTGCCG
CTGGATATGCAGGTCAAACTGTTGAGGGCCATCCAGGAAAAAGCCGTGCGCCCGGTAGGAGGCCAAAACGAAATCAGTAC
GGACGTGCGCATACTCTGCGCCACCCACAAAGCGCTGGATCAGGAAGTGCTGCAGGGCCGGTTTCGTCAGGATCTTTTCT
ATCGACTGAATGTTATTCAATTGCGGGTGCCACCGCTGCGGGAACGGCGGGAGGATATCGCCATGCTGGCCCGCCACATA
CTCGAACAACTGGCCCGAGAGGTCAATTTCCCCACGCCACAGCTGAGCCAACCGGCCATGAAACAGCTCTGCGAGTATCA
TTTCCCGGGGAATGTCCGGGAGCTTGAAAACATTCTGGAACGAGCGTTTACGCTCTGTGAAAGCCAGGTCATCGACCCGG
CTGATCTGCACCTCCCGGACAATACCGACCCGATGGGTAACGGCATGGAACCCGCCAATGACGGCGCAGGCAACCATGTC
GCCCGCTGCGCGGAGTACCCTTCTCTGGATCATTATCTTCAGGAAGTCGAGAAAGACATCCTGTGCAATGCACTTGAGCA
GGCCAAGTGGAATAAAACCCAAGCGGCAAAAAACCTGGGCATCAGCTTCCGGTCACTGCGCTACCGGCTACAGAAACTGG
GGCTGGACGACGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (413-453)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.868	99.563	0.596
pilR	Acinetobacter baumannii strain A118	50.976	100	0.513