Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OO001_RS01255 Genome accession   NZ_CP110611
Coordinates   299721..300386 (+) Length   221 a.a.
NCBI ID   WP_001830679.1    Uniprot ID   A0A2G7HYS8
Organism   Staphylococcus epidermidis strain CCSM0287     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 294721..305386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OO001_RS01240 - 296079..297622 (+) 1544 Protein_246 NAD(P)H-binding protein -
  OO001_RS01245 - 297745..299214 (-) 1470 WP_002456720.1 alkaline phosphatase -
  OO001_RS01250 - 299511..299690 (+) 180 WP_002456719.1 hypothetical protein -
  OO001_RS01255 braR 299721..300386 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  OO001_RS01260 braS 300392..301288 (+) 897 WP_002456718.1 HAMP domain-containing sensor histidine kinase Regulator
  OO001_RS01265 - 301399..302148 (+) 750 WP_002456717.1 ABC transporter ATP-binding protein -
  OO001_RS01270 - 302150..304162 (+) 2013 WP_002470142.1 ABC transporter permease -
  OO001_RS01275 - 304266..304856 (+) 591 WP_002456715.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.71 Da        Isoelectric Point: 5.0250

>NTDB_id=755327 OO001_RS01255 WP_001830679.1 299721..300386(+) (braR) [Staphylococcus epidermidis strain CCSM0287]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=755327 OO001_RS01255 WP_001830679.1 299721..300386(+) (braR) [Staphylococcus epidermidis strain CCSM0287]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGATAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G7HYS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792