Detailed information NTG0755055

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ONG97_RS01105
• Genome accession: NZ_CP110483
• Coordinates: 184603..187026 (+)
• Length: 807 a.a.
• NCBI ID: WP_265115155.1
• Uniprot ID: -
• Organism: Heyndrickxia coagulans strain XY2
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	187479..188597	184603..187026	flank	453

Gene organization within MGE regions

Location: 184603..188597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ONG97_RS01105 (ONG97_01105)	recD2	184603..187026 (+)	2424	WP_265115155.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ONG97_RS01110 (ONG97_01110)	-	187251..187391 (-)	141	WP_013860635.1	ribbon-helix-helix protein, CopG family	-
ONG97_RS01115 (ONG97_01115)	-	187479..188597 (+)	1119	WP_265115156.1	transposase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90698.76 Da
• Isoelectric Point: 4.8229

>NTDB_id=755055 ONG97_RS01105 WP_265115155.1 184603..187026(+) (recD2) [Heyndrickxia coagulans strain XY2]
MEKQHAMDLFQDQENFIKGKHLATIFHNEQNLYSVIRVRVEETNTGMEEKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVVEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIHDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEMIAQNPYRLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDVKALLEEYQNVEIPVGLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERLGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
AFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEDRQVEGKFVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSGAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLAEALKTEQIEAGTETLLSLTEENWDQVDPMIGMEGITPYTFAEEK
QTAPQAD

Nucleotide

• Length: 2424 bp

>NTDB_id=755055 ONG97_RS01105 WP_265115155.1 184603..187026(+) (recD2) [Heyndrickxia coagulans strain XY2]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACCAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATTTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTTGAAGAGACCAATACCGGGATGGAAGAAAAGGAAACGGTCA
TTACCGGCTATTTTCCGCGCATCCATGAGCAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAATTCCAGGCAAACCGCTTTCAGAAGGACATTCCCAATACAAAGCAGGGTGTTGTTGAGTATCTTTCCAGTGATTT
ATTCAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCAAAACTGGCGCCGGAAAAAGCACAGCTGATTCATGATACGTTGGTTGAACACCAG
GGGCTTGAACGTGTCATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAATGATCGCACAAAATCCGTACCGGCTCGTTGATGATATCAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCATGGCCATGTGTACGTCCTGAAAGAAGAACTTGCGCAGGATGTCAAAGCCCTTTTGGAAGAGTACCA
GAATGTTGAAATCCCGGTCGGCCTGATTGAAAATGAGCTGGTAAAACTGCAGGAAGAGAGCAAAGTGATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATAATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAGTCGGAATTCCTGCTTGCCCTGGGCAGCCTTGAAGAACGGCTCGGCGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGCCCGATGATGATTTTAACGGGCGGACCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGCGAATTGCACGGCGTTTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GCATTTCCGATTGTCCTCGCGGCGCCGACAGGGAGGGCCGCGAAAAGAATGGCGGAGTCAACCGGTCTGCCGGCAATGAC
AATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTAGACGATTCAGAGGACCGGCAGGTAGAAGGCAAGTTCGTCA
TTATTGATGAAATGTCGATGGTCGATACATGGCTTGCAAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAGGTCATT
ATGGTCGGAGATGAAGACCAGCTGCCGTCCGTCGGTCCGGGCCAGGTGCTGAAAGATTTATTGAAATCGGGTGCCATCCC
GGTTGTCAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTCAAAAATGGGC
GTATTCCGGAAAATATTTTTCAAATGCAGGCGGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCAGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATCCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGCCTGAACAGCCTTTTGCAAAATATTTTTAATCCGAATGAGAACGGCGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTGCTGCAGCTTGTCAACCAGCCGGAACACGGAGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCCCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGACGGGAT
TGAAGTGACGTATACGAAGCCTGATTTCAACCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTCCCGGTAGTGATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACTGCGATCACA
AGAAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAACG
GAAGACGACACTGTGTGAAAAACTGGCTGAAGCATTAAAAACGGAACAAATAGAGGCAGGGACGGAGACACTCCTGTCCC
TGACAGAAGAAAATTGGGACCAGGTCGACCCGATGATTGGCATGGAGGGCATTACCCCGTACACTTTCGCGGAAGAAAAG
CAAACGGCTCCCCAAGCGGATTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.549	99.257	0.601