Detailed information NTG0754282

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: PALA52_RS26020
• Genome accession: NZ_CP110347
• Coordinates: 5647968..5649032 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PALA52
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5642968..5654032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PALA52_RS25995 (PALA52_05156)	aroK	5643500..5644018 (-)	519	WP_003095833.1	shikimate kinase AroK	-
PALA52_RS26000 (PALA52_05157)	pilQ	5644030..5646174 (-)	2145	WP_024916548.1	type 4a pilus secretin PilQ	Machinery gene
PALA52_RS26005 (PALA52_05158)	pilP	5646228..5646752 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
PALA52_RS26010 (PALA52_05159)	pilO	5646749..5647372 (-)	624	WP_024916549.1	type 4a pilus biogenesis protein PilO	-
PALA52_RS26015 (PALA52_05160)	pilN	5647369..5647968 (-)	600	WP_024916550.1	type 4a pilus biogenesis protein PilN	-
PALA52_RS26020 (PALA52_05161)	pilM	5647968..5649032 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
PALA52_RS26025 (PALA52_05162)	-	5649217..5651688 (+)	2472	WP_024916551.1	penicillin-binding protein 1A	-
PALA52_RS26030 (PALA52_05163)	-	5651784..5653052 (-)	1269	WP_024916552.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=754282 PALA52_RS26020 WP_003110888.1 5647968..5649032(-) (pilM) [Pseudomonas aeruginosa strain PALA52]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=754282 PALA52_RS26020 WP_003110888.1 5647968..5649032(-) (pilM) [Pseudomonas aeruginosa strain PALA52]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTGAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATTACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCACTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTTTCCGCGC
GCAATCCCGAGCGCGTGGACGTGCTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTCCGCGAAGCGGCCCTGGCGCTG
GCCGGACTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGTTCCTATGCGCTGCTGAGCAGCCAACTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTCCACAACGGAC
GCACCATCTATACCCGCGAGCAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGTTCGTTGCAGTTCTTCTTCGCCGCCGGGCAGTTCAACGACGTCGACTACATCGTCCTGG
CCGGCGGTACGGCGTCCATCCAGGATCTCGATCGCTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGTGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466