Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LJ360_RS18400 Genome accession   NZ_CP110342
Coordinates   3991029..3991421 (+) Length   130 a.a.
NCBI ID   WP_091852009.1    Uniprot ID   A0A1I0EME8
Organism   Marinobacter sp. AN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3986029..3996421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJ360_RS18370 (LJ360_18370) - 3986297..3987337 (-) 1041 WP_264994693.1 aspartate carbamoyltransferase catalytic subunit -
  LJ360_RS18375 (LJ360_18375) pyrR 3987334..3987843 (-) 510 WP_264994694.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LJ360_RS18380 (LJ360_18380) ruvX 3987851..3988312 (-) 462 WP_091851997.1 Holliday junction resolvase RuvX -
  LJ360_RS18385 (LJ360_18385) - 3988305..3988871 (-) 567 WP_091852000.1 YqgE/AlgH family protein -
  LJ360_RS18390 (LJ360_18390) - 3988868..3989731 (-) 864 WP_091852003.1 energy transducer TonB -
  LJ360_RS18395 (LJ360_18395) gshB 3989773..3990720 (-) 948 WP_091852006.1 glutathione synthase -
  LJ360_RS18400 (LJ360_18400) pilG 3991029..3991421 (+) 393 WP_091852009.1 twitching motility response regulator PilG Regulator
  LJ360_RS18405 (LJ360_18405) pilH 3991454..3991816 (+) 363 WP_091852208.1 twitching motility response regulator PilH -
  LJ360_RS18410 (LJ360_18410) - 3991839..3992384 (+) 546 WP_091852012.1 chemotaxis protein CheW -
  LJ360_RS18415 (LJ360_18415) - 3992467..3994542 (+) 2076 WP_264994695.1 methyl-accepting chemotaxis protein -
  LJ360_RS18420 (LJ360_18420) - 3994571..3995470 (+) 900 WP_091852020.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14616.88 Da        Isoelectric Point: 5.8904

>NTDB_id=754147 LJ360_RS18400 WP_091852009.1 3991029..3991421(+) (pilG) [Marinobacter sp. AN1]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=754147 LJ360_RS18400 WP_091852009.1 3991029..3991421(+) (pilG) [Marinobacter sp. AN1]
ATGGATGACAACTTCGAAAATCTGAAAATCATGGTGATTGACGACAGCAAGACCATTCGTCGCACCGCAGAAACGCTGCT
CAAAAAAGTGGGCTGCGAGGTAATCACCGCGACGGACGGATTTGATGCGCTCGCGAAAATAGCCGACTCCCACCCCGATA
TCATTTTCGTGGACATCATGATGCCACGACTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACTCCGCATTCCGC
AAGACACCCGTTATCATGCTGTCGAGTAAGGACGGGCTGTTTGACAAGGCCAAGGGGCGTATTGTCGGGTCAGACCAGTA
TCTGACCAAACCGTTCAGCAAGGACGAGCTGCTTAACACGATTCGCCAGTATGTTCCCCAGGCGGAACAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I0EME8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392