Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | UKS_RS07405 | Genome accession | NZ_AP021887 |
| Coordinates | 1457595..1458827 (-) | Length | 410 a.a. |
| NCBI ID | WP_156012415.1 | Uniprot ID | A0A6H3SFA6 |
| Organism | Streptococcus sp. 116-D4 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1452595..1463827
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UKS_RS07375 (UKS_14210) | - | 1452782..1453750 (+) | 969 | WP_156012403.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| UKS_RS07380 (UKS_14220) | whiA | 1453785..1454696 (-) | 912 | WP_156012405.1 | DNA-binding protein WhiA | - |
| UKS_RS07385 (UKS_14230) | - | 1454693..1455670 (-) | 978 | WP_156012407.1 | YvcK family protein | - |
| UKS_RS07390 (UKS_14240) | rapZ | 1455667..1456557 (-) | 891 | WP_156012409.1 | RNase adapter RapZ | - |
| UKS_RS07395 (UKS_14250) | - | 1456609..1456989 (-) | 381 | WP_156012411.1 | RidA family protein | - |
| UKS_RS07400 (UKS_14260) | yihA | 1456999..1457586 (-) | 588 | WP_156012413.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| UKS_RS07405 (UKS_14270) | clpX | 1457595..1458827 (-) | 1233 | WP_156012415.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| UKS_RS07410 (UKS_14280) | - | 1458864..1459034 (-) | 171 | WP_000442260.1 | hypothetical protein | - |
| UKS_RS07415 (UKS_14290) | - | 1459034..1459540 (-) | 507 | WP_156012417.1 | dihydrofolate reductase | - |
| UKS_RS07420 (UKS_14300) | - | 1459671..1460189 (-) | 519 | WP_173020475.1 | Dps family protein | - |
| UKS_RS07425 (UKS_14310) | lytC | 1460417..1462012 (-) | 1596 | WP_156013073.1 | choline binding-anchored murein hydrolase LytC | - |
| UKS_RS07430 (UKS_14320) | tpiA | 1462061..1462819 (-) | 759 | WP_156012421.1 | triose-phosphate isomerase | - |
| UKS_RS07435 (UKS_14330) | - | 1462917..1463594 (-) | 678 | WP_156012422.1 | DnaD domain-containing protein | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45672.19 Da Isoelectric Point: 4.4455
>NTDB_id=75368 UKS_RS07405 WP_156012415.1 1457595..1458827(-) (clpX) [Streptococcus sp. 116-D4]
MPTNRNNDMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGKKVIGFGQNSKTIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQALLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDIMFEVPSQENVKLVRITKEAVD
GTDKPILETA
MPTNRNNDMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGKKVIGFGQNSKTIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQALLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDIMFEVPSQENVKLVRITKEAVD
GTDKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=75368 UKS_RS07405 WP_156012415.1 1457595..1458827(-) (clpX) [Streptococcus sp. 116-D4]
ATGCCTACAAATAGGAATAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTACAAAAAATAAT
CGCAGGCAACAACGCCTTTATCTGTAATGAATGTGTGGAGTTGGCTCAGGAAATTATTCGGGAGGAGTTGGCTGAGGAAG
TCTTGGCAGACTTGTCTGAAGTTCCAAAACCAATCGAACTTCTCAATATCTTGAACCACTATGTAATCGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTTGCAGTTTATAACCACTACAAACGCATCAATTTCCATGATACACGCGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAACATCTTGATGATTGGCCCAACTGGTTCAGGGAAAACATTCCTTGCTCAAACCCTTGCTA
GAAGTTTGAATGTTCCATTTGCGATTGCAGATGCGACAGCCTTGACGGAAGCTGGTTATGTGGGTGAGGACGTGGAAAAT
ATCCTCCTCAAACTCTTGCAAGCTGCTGACTTTAACATCGAGCGTGCAGAGCGTGGTATTATCTACGTGGATGAAATTGA
TAAGATTGCCAAGAAGAGCGAGAATGTGTCTATTACACGTGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTCCTCAAGA
TTATTGAAGGAACTGTAGCTAGCGTACCTCCTCAAGGCGGACGTAAACATCCACAACAAGAAATGATTCAAGTGGACACT
AAGAATATCCTTTTTATCGTGGGTGGTGCCTTTGATGGAATCGAAGAAATTGTCAAGCAGCGTTTGGGTAAAAAAGTCAT
TGGTTTCGGGCAAAACAGCAAGACCATTGACGAAAACAGTTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TTGGGATTATCCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCTCTGGAGCAATTGACTGTTGATGACTTGGTTCGT
ATCTTGAAAGAGCCACGAAATGCTTTGGTCAAACAATACCAGGCCTTGCTTTCTTATGATGATGTCGAGTTGGAATTTGA
CGACGAAGCCCTTCAAGAGATTGCTAATAAGGCCATCGAACGTAAGACAGGAGCGCGTGGTCTTCGCTCCATTATCGAAG
AAACCATGCTGGACATTATGTTTGAAGTACCGAGTCAGGAAAATGTGAAATTGGTCCGCATCACAAAAGAAGCTGTCGAT
GGAACGGATAAACCAATCCTAGAAACAGCCTAG
ATGCCTACAAATAGGAATAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTACAAAAAATAAT
CGCAGGCAACAACGCCTTTATCTGTAATGAATGTGTGGAGTTGGCTCAGGAAATTATTCGGGAGGAGTTGGCTGAGGAAG
TCTTGGCAGACTTGTCTGAAGTTCCAAAACCAATCGAACTTCTCAATATCTTGAACCACTATGTAATCGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTTGCAGTTTATAACCACTACAAACGCATCAATTTCCATGATACACGCGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAACATCTTGATGATTGGCCCAACTGGTTCAGGGAAAACATTCCTTGCTCAAACCCTTGCTA
GAAGTTTGAATGTTCCATTTGCGATTGCAGATGCGACAGCCTTGACGGAAGCTGGTTATGTGGGTGAGGACGTGGAAAAT
ATCCTCCTCAAACTCTTGCAAGCTGCTGACTTTAACATCGAGCGTGCAGAGCGTGGTATTATCTACGTGGATGAAATTGA
TAAGATTGCCAAGAAGAGCGAGAATGTGTCTATTACACGTGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTCCTCAAGA
TTATTGAAGGAACTGTAGCTAGCGTACCTCCTCAAGGCGGACGTAAACATCCACAACAAGAAATGATTCAAGTGGACACT
AAGAATATCCTTTTTATCGTGGGTGGTGCCTTTGATGGAATCGAAGAAATTGTCAAGCAGCGTTTGGGTAAAAAAGTCAT
TGGTTTCGGGCAAAACAGCAAGACCATTGACGAAAACAGTTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TTGGGATTATCCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCTCTGGAGCAATTGACTGTTGATGACTTGGTTCGT
ATCTTGAAAGAGCCACGAAATGCTTTGGTCAAACAATACCAGGCCTTGCTTTCTTATGATGATGTCGAGTTGGAATTTGA
CGACGAAGCCCTTCAAGAGATTGCTAATAAGGCCATCGAACGTAAGACAGGAGCGCGTGGTCTTCGCTCCATTATCGAAG
AAACCATGCTGGACATTATGTTTGAAGTACCGAGTCAGGAAAATGTGAAATTGGTCCGCATCACAAAAGAAGCTGTCGAT
GGAACGGATAAACCAATCCTAGAAACAGCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
86.098 |
100 |
0.861 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.214 |
98.049 |
0.561 |