Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   QEP20_RS19105 Genome accession   NZ_CP123977
Coordinates   3684244..3684618 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain WH60A     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3679244..3689618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP20_RS19080 (QEP20_19080) - 3679408..3679569 (-) 162 WP_003227632.1 hypothetical protein -
  QEP20_RS19085 (QEP20_19085) glpX 3679784..3680749 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  QEP20_RS19090 (QEP20_19090) murAB 3680780..3682069 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  QEP20_RS19095 (QEP20_19095) fsa 3682448..3683086 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  QEP20_RS19100 (QEP20_19100) fbaA 3683206..3684063 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  QEP20_RS19105 (QEP20_19105) letA 3684244..3684618 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  QEP20_RS19110 (QEP20_19110) ywjG 3684784..3685305 (+) 522 WP_029726065.1 DUF2529 domain-containing protein -
  QEP20_RS19115 (QEP20_19115) pyrG 3685387..3686994 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  QEP20_RS19120 (QEP20_19120) rpoE 3687237..3687758 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  QEP20_RS19125 (QEP20_19125) acdA 3687941..3689080 (-) 1140 WP_015251002.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=753609 QEP20_RS19105 WP_003227621.1 3684244..3684618(-) (letA) [Bacillus subtilis subsp. subtilis strain WH60A]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=753609 QEP20_RS19105 WP_003227621.1 3684244..3684618(-) (letA) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363