Detailed information NTG0753578

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: OMK57_RS13160
• Genome accession: NZ_CP110264
• Coordinates: 2635159..2635776 (-)
• Length: 205 a.a.
• NCBI ID: WP_059293571.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain HMB20199
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2630159..2640776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OMK57_RS13130 (OMK57_13130)	rpsT	2630463..2630729 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
OMK57_RS13135 (OMK57_13135)	holA	2630744..2631787 (-)	1044	WP_044154489.1	DNA polymerase III subunit delta	-
OMK57_RS13140 (OMK57_13140)	-	2631827..2631976 (-)	150	WP_125825438.1	hypothetical protein	-
OMK57_RS13145 (OMK57_13145)	-	2632017..2632151 (+)	135	WP_010335005.1	YqzM family protein	-
OMK57_RS13150 (OMK57_13150)	comEC	2632190..2634520 (-)	2331	WP_069487175.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OMK57_RS13155 (OMK57_13155)	-	2634524..2635093 (-)	570	WP_069487174.1	ComE operon protein 2	-
OMK57_RS13160 (OMK57_13160)	comEA	2635159..2635776 (-)	618	WP_059293571.1	helix-hairpin-helix domain-containing protein	Machinery gene
OMK57_RS13165 (OMK57_13165)	comER	2635860..2636681 (+)	822	WP_059335445.1	late competence protein ComER	-
OMK57_RS13170 (OMK57_13170)	-	2636746..2637489 (-)	744	WP_024122114.1	class I SAM-dependent methyltransferase	-
OMK57_RS13175 (OMK57_13175)	rsfS	2637486..2637842 (-)	357	WP_044154484.1	ribosome silencing factor	-
OMK57_RS13180 (OMK57_13180)	yqeK	2637860..2638420 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
OMK57_RS13185 (OMK57_13185)	-	2638410..2638979 (-)	570	WP_069487173.1	nicotinate-nucleotide adenylyltransferase	-
OMK57_RS13190 (OMK57_13190)	yhbY	2638990..2639280 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
OMK57_RS13195 (OMK57_13195)	aroE	2639280..2640116 (-)	837	WP_059335447.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21982.84 Da
• Isoelectric Point: 5.1547

>NTDB_id=753578 OMK57_RS13160 WP_059293571.1 2635159..2635776(-) (comEA) [Bacillus halotolerans strain HMB20199]
MNWLNQHKTIIMSAGSAAVLIAVLCLFFFSGHNKEPVKQVVSSEKENAEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=753578 OMK57_RS13160 WP_059293571.1 2635159..2635776(-) (comEA) [Bacillus halotolerans strain HMB20199]
TTGAATTGGTTGAACCAACATAAAACGATAATCATGTCAGCGGGCTCTGCTGCTGTTCTCATTGCAGTTCTATGCCTCTT
TTTTTTCAGCGGACATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGCTGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATTGATATAAAAGGCGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTGTCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCACAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAATACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCTGAAGCGATTATTGCATATCGGGAAGAGAACGGGCGTTTCCAAACAATTGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.67	100	0.78
comEA	Staphylococcus aureus MW2	38.182	100	0.41
comEA	Staphylococcus aureus N315	37.387	100	0.405
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	37.736	100	0.39
comEA	Latilactobacillus sakei subsp. sakei 23K	35.78	100	0.38