Detailed information NTG0753576

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QEP20_RS14095
• Genome accession: NZ_CP123977
• Coordinates: 2702076..2702681 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain WH60A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2697076..2707681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEP20_RS14065 (QEP20_14065)	-	2697889..2698278 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
QEP20_RS14070 (QEP20_14070)	yajC	2698335..2698601 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
QEP20_RS14075 (QEP20_14075)	tgt	2698638..2699783 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
QEP20_RS14080 (QEP20_14080)	queA	2699810..2700838 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QEP20_RS14085 (QEP20_14085)	yrzS	2700868..2701068 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
QEP20_RS14090 (QEP20_14090)	ruvB	2701061..2702065 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QEP20_RS14095 (QEP20_14095)	ruvA	2702076..2702681 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
QEP20_RS14100 (QEP20_14100)	bofC	2702820..2703332 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
QEP20_RS14105 (QEP20_14105)	csbX	2703380..2704687 (-)	1308	WP_003246197.1	MFS transporter	-
QEP20_RS14110 (QEP20_14110)	iolG	2704758..2705783 (-)	1026	WP_029318179.1	inositol 2-dehydrogenase	-
QEP20_RS14115 (QEP20_14115)	yrzF	2706021..2706668 (+)	648	WP_003246159.1	phosphotransferase	-
QEP20_RS14120 (QEP20_14120)	-	2706714..2706836 (-)	123	WP_003229707.1	hypothetical protein	-
QEP20_RS14125 (QEP20_14125)	-	2706921..2706995 (+)	75	Protein_2736	hypothetical protein	-
QEP20_RS14130 (QEP20_14130)	-	2706999..2707367 (+)	369	WP_224912982.1	DUF5412 family protein	-
QEP20_RS14135 (QEP20_14135)	-	2707374..2707514 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=753576 QEP20_RS14095 WP_003229717.1 2702076..2702681(-) (ruvA) [Bacillus subtilis subsp. subtilis strain WH60A]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=753576 QEP20_RS14095 WP_003229717.1 2702076..2702681(-) (ruvA) [Bacillus subtilis subsp. subtilis strain WH60A]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCAGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408