Detailed information NTG0753464

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QGO80_RS10880
• Genome accession: NZ_CP123969
• Coordinates: 2166996..2168105 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264869.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain CS2108
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2161996..2173105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QGO80_RS10855 (QGO80_10855)	-	2162368..2163207 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
QGO80_RS10860 (QGO80_10860)	pgsA	2163207..2163749 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QGO80_RS10865 (QGO80_10865)	-	2163872..2165155 (-)	1284	WP_000217765.1	pitrilysin family protein	-
QGO80_RS10870 (QGO80_10870)	-	2165157..2166401 (-)	1245	WP_000706190.1	pitrilysin family protein	-
QGO80_RS10875 (QGO80_10875)	yaaA	2166640..2166993 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
QGO80_RS10880 (QGO80_10880)	recF	2166996..2168105 (+)	1110	WP_000264869.1	DNA replication/repair protein RecF	Machinery gene
QGO80_RS10885 (QGO80_10885)	-	2168117..2168983 (-)	867	WP_000398683.1	GRP family sugar transporter	-
QGO80_RS10890 (QGO80_10890)	-	2169039..2169701 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
QGO80_RS10895 (QGO80_10895)	guaB	2169776..2171257 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
QGO80_RS10900 (QGO80_10900)	-	2171414..2171899 (-)	486	WP_001034427.1	arginine repressor	-
QGO80_RS10905 (QGO80_10905)	-	2171909..2172589 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42452.23 Da
• Isoelectric Point: 7.1759

>NTDB_id=753464 QGO80_RS10880 WP_000264869.1 2166996..2168105(+) (recF) [Streptococcus agalactiae strain CS2108]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHHDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=753464 QGO80_RS10880 WP_000264869.1 2166996..2168105(+) (recF) [Streptococcus agalactiae strain CS2108]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCATGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.361	98.374	0.623
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444