Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG   Type   Machinery gene
Locus tag   QGO80_RS01155 Genome accession   NZ_CP123969
Coordinates   201337..201708 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae strain CS2108     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 196337..206708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QGO80_RS01135 (QGO80_01135) - 198461..198826 (+) 366 WP_000285373.1 DUF1033 family protein -
  QGO80_RS01140 (QGO80_01140) comGA 198999..199970 (+) 972 WP_000250805.1 competence type IV pilus ATPase ComGA Machinery gene
  QGO80_RS01145 (QGO80_01145) comGB 199864..200907 (+) 1044 Protein_169 competence type IV pilus assembly protein ComGB -
  QGO80_RS01150 (QGO80_01150) comGF 200904..201359 (+) 456 WP_000793378.1 competence type IV pilus minor pilin ComGF Machinery gene
  QGO80_RS01155 (QGO80_01155) comGG 201337..201708 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  QGO80_RS01160 (QGO80_01160) comGH 201823..202797 (+) 975 WP_001008574.1 N-6 DNA methylase Machinery gene
  QGO80_RS01165 (QGO80_01165) - 202829..204022 (+) 1194 WP_000047534.1 acetate kinase -
  QGO80_RS01170 (QGO80_01170) - 204174..204380 (+) 207 WP_000798241.1 helix-turn-helix transcriptional regulator -
  QGO80_RS01175 (QGO80_01175) - 204448..204576 (+) 129 WP_014959723.1 hypothetical protein -
  QGO80_RS01180 (QGO80_01180) - 204617..205072 (+) 456 WP_000905673.1 hypothetical protein -
  QGO80_RS01185 (QGO80_01185) - 205141..205806 (+) 666 WP_000008113.1 type II CAAX endopeptidase family protein -
  QGO80_RS01190 (QGO80_01190) proC 205827..206597 (-) 771 WP_001865901.1 pyrroline-5-carboxylate reductase -

Sequence


Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=753380 QGO80_RS01155 WP_000601104.1 201337..201708(+) (comGG) [Streptococcus agalactiae strain CS2108]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=753380 QGO80_RS01155 WP_000601104.1 201337..201708(+) (comGG) [Streptococcus agalactiae strain CS2108]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366

  comGG Streptococcus mutans UA159

44.554

82.114

0.366