Detailed information NTG0753381

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OKW95_RS10520
• Genome accession: NZ_CP110254
• Coordinates: 2250066..2250881 (-)
• Length: 271 a.a.
• NCBI ID: WP_013198080.1
• Uniprot ID: A0AAN0UDG8
• Organism: Acinetobacter oleivorans strain S4
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2245066..2255881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKW95_RS10490 (OKW95_10490)	-	2245377..2245817 (-)	441	WP_013198075.1	SRPBCC family protein	-
OKW95_RS10495 (OKW95_10495)	tadA	2245885..2246388 (-)	504	WP_005304734.1	tRNA adenosine(34) deaminase TadA	-
OKW95_RS10500 (OKW95_10500)	-	2246394..2247518 (-)	1125	WP_013198077.1	enoyl-CoA hydratase/isomerase family protein	-
OKW95_RS10505 (OKW95_10505)	ung	2247515..2248228 (-)	714	WP_005304723.1	uracil-DNA glycosylase	-
OKW95_RS10510 (OKW95_10510)	-	2248282..2248878 (-)	597	WP_013198078.1	6-pyruvoyl trahydropterin synthase family protein	-
OKW95_RS10515 (OKW95_10515)	gspK	2249107..2250066 (-)	960	WP_013198079.1	type II secretion system minor pseudopilin GspK	-
OKW95_RS10520 (OKW95_10520)	xcpW	2250066..2250881 (-)	816	WP_013198080.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OKW95_RS10525 (OKW95_10525)	xcpV	2250881..2251261 (-)	381	WP_004792732.1	type II secretion system minor pseudopilin GspI	Machinery gene
OKW95_RS10530 (OKW95_10530)	-	2251251..2251805 (-)	555	WP_013198081.1	type II secretion system protein	-
OKW95_RS10535 (OKW95_10535)	-	2251815..2252423 (-)	609	WP_034591080.1	TetR/AcrR family transcriptional regulator	-
OKW95_RS10540 (OKW95_10540)	-	2252460..2253233 (-)	774	WP_144730605.1	TatD family hydrolase	-
OKW95_RS10545 (OKW95_10545)	-	2253251..2253592 (-)	342	WP_003651467.1	PilZ domain-containing protein	-
OKW95_RS10550 (OKW95_10550)	-	2253603..2254583 (-)	981	WP_144730608.1	DNA polymerase III subunit delta'	-
OKW95_RS10555 (OKW95_10555)	kdsB	2254597..2255358 (-)	762	WP_199944574.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30863.31 Da
• Isoelectric Point: 10.1109

>NTDB_id=753381 OKW95_RS10520 WP_013198080.1 2250066..2250881(-) (xcpW) [Acinetobacter oleivorans strain S4]
MIKNKYLRSRSPVSHLAARSEQMMRGYSEQSSSSCAQTKRGFKDSHTRNTVSRLTARSSSARLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQILRDTLQIIPLSANQGGQLRPALELDNQVLHFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKG
IKIQLTVAGVSYEWIYSLNQGDLSLSNKGVG

Nucleotide

• Length: 816 bp

>NTDB_id=753381 OKW95_RS10520 WP_013198080.1 2250066..2250881(-) (xcpW) [Acinetobacter oleivorans strain S4]
ATGATAAAAAATAAATATCTTCGCTCGAGAAGTCCAGTTTCTCATCTTGCTGCACGATCGGAGCAGATGATGAGAGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCGTGGCTTTAAAGACTCTCACACTCGAAACACAGTTTCTCGTC
TTACGGCACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATT
TTTGCTGTTCTATCTTTGTTGGGCTGGAAGATCTTTGATTATTTATTAAAAGTCCGTGATCGTAATGCACAACACGAAGT
ACAGTTATTCGAATTACAAGATGCTTATCAACAAATTTTACGTGATACGTTGCAAATTATACCTTTATCGGCTAATCAAG
GCGGGCAACTACGTCCAGCCTTAGAACTTGATAATCAAGTTCTTCACTTTAGTAAGGCTGGTGTTACGGATCCCTTAAAA
CAAGGGTTGTCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
TTTAAATACTTCAAACAGAGAGCAACCACTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTGCTAA
CGCCTCAAGAAGTGACAAAGTGGCCAGAAATTAATATTGATCCCACAAAACCTGAAGAATTTAGAAAGTTGCCGAAAGGA
ATAAAAATACAACTTACAGTTGCCGGTGTAAGTTATGAGTGGATTTATAGCTTAAATCAAGGTGATTTATCGCTCTCCAA
TAAAGGAGTGGGATAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	90.179	82.657	0.745