Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   OKW95_RS03330 Genome accession   NZ_CP110254
Coordinates   683326..687828 (+) Length   1500 a.a.
NCBI ID   WP_013196910.1    Uniprot ID   A0AAN0P656
Organism   Acinetobacter oleivorans strain S4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 678326..692828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW95_RS03305 (OKW95_03305) - 678768..679403 (-) 636 WP_199945352.1 hypothetical protein -
  OKW95_RS03310 (OKW95_03310) pilG 679688..680071 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  OKW95_RS03315 (OKW95_03315) - 680095..680457 (+) 363 WP_004789266.1 PleD family two-component system response regulator -
  OKW95_RS03320 (OKW95_03320) - 680517..681053 (+) 537 WP_003655289.1 chemotaxis protein CheW -
  OKW95_RS03325 (OKW95_03325) - 681097..683178 (+) 2082 WP_199945353.1 methyl-accepting chemotaxis protein -
  OKW95_RS03330 (OKW95_03330) chpA 683326..687828 (+) 4503 WP_013196910.1 hybrid sensor histidine kinase/response regulator Regulator
  OKW95_RS03335 (OKW95_03335) - 687828..688295 (+) 468 WP_013196911.1 hypothetical protein -
  OKW95_RS03340 (OKW95_03340) dapE 688329..689465 (-) 1137 WP_013196912.1 succinyl-diaminopimelate desuccinylase -
  OKW95_RS03345 (OKW95_03345) - 689591..689734 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  OKW95_RS03350 (OKW95_03350) - 689857..690738 (-) 882 WP_013196913.1 DUF1853 family protein -
  OKW95_RS03355 (OKW95_03355) - 690842..691210 (+) 369 WP_013196914.1 YbaN family protein -
  OKW95_RS03360 (OKW95_03360) elsL 691483..691986 (+) 504 WP_013196915.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1500 a.a.        Molecular weight: 171398.86 Da        Isoelectric Point: 4.4398

>NTDB_id=753377 OKW95_RS03330 WP_013196910.1 683326..687828(+) (chpA) [Acinetobacter oleivorans strain S4]
MKEILKTLTEAMMLPEDSYSQQDAEFLDIFVEEIEEIFVELQSLIHEWMQSKNVATLTEIRRHFHTLKGSGRMIAAKSSA
ELAWTVEDTLNRIINESLTLTPNIQQYVQLVFKFYFFKLVDDFKSKKEHAVDFRPLILLGQQLQQQQSLEPALEELLLLS
DTLTAETKTGLEVNDLEQASDNLILETTIESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSEEILLLRDYRQFIRNCLDLLAAYCSNDQLDSNLKQFNQVWDAYMEQHG
EHSSPLMPPHGLVSQLLQLNVSELLDAELDFEKGIRSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDVLL
DRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLEELKLYTQHIPSLNSEPLDNQDVVESLFSVDVEQT
SDESPASIESVLTDHVAMSQSMHLDRQFMTTEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWVNDQENFAALNNLMRY
LHTLKGGANMIQANYIGLIAHELESIYERIIQRQLVASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKSAGK
VYESLGSVVKEMQAESETDVIPELNVEVLQQEAINDTALNLDELTSNFEQIVESNTRLVEHTELQIFDAEGYTDSIQDQD
IDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEKFALYHFSS
NIYDNLLESAIVWLKEAIFKQNYQHFDGLQHSLENIQFIETAIQIPSKLTRTDLFGTEPVMSFVQGDGTEPPPMIGAWEQ
TQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAKHGIEHS
RYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRI
VRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQAKKPETGRIELNIHRQGTDVVVTFK
DDGRGIDIEKVRQKALLSGLINSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVTVDSVYGQG
TIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRLS
GMMYSLPVLMIKANNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHKS
LNETVYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLV
RHHDLHQHMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDAFFTTREEELA

Nucleotide


Download         Length: 4503 bp        

>NTDB_id=753377 OKW95_RS03330 WP_013196910.1 683326..687828(+) (chpA) [Acinetobacter oleivorans strain S4]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGCTGAATTTCT
TGATATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTTTGATTCATGAATGGATGCAATCTAAAAATG
TTGCTACGCTGACTGAGATCCGTCGCCATTTTCATACCTTGAAAGGTTCAGGGCGAATGATTGCAGCGAAATCCTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGATCATCAATGAGAGTCTCACATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAATTAGTAGATGACTTTAAATCTAAAAAGGAACATGCAGTAGATTTTA
GACCTCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTCT
GATACTCTCACTGCGGAAACTAAAACTGGTTTAGAGGTGAATGATTTAGAGCAGGCGTCAGATAATTTAATCCTAGAAAC
CACGATAGAAAGTGAACATAATCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAAGAGCATTTAGCGACCATTG
ATCAATTTTTAGAACAAGAAATACATCAGCACGAGAGTTATAATGCGCTCATACGTGCATTACATACATTGCGCGGTAGC
TCGGCAATGGCTCAGGTCGAAGCAATTTTTGATGCTAGTACGAAGGTTGAGCATTTATTCAAAATCTTATTACAAGAAGA
ACTTTCTTCTCATTCAGAAGAGATATTACTACTCCGTGATTACAGACAGTTTATTCGAAATTGTTTAGATCTATTAGCTG
CGTATTGCTCTAATGACCAATTAGATTCTAATCTGAAACAGTTTAACCAAGTTTGGGATGCTTATATGGAGCAGCATGGG
GAGCATTCAAGCCCACTCATGCCTCCACATGGTCTGGTATCTCAGCTGTTACAGCTCAATGTTTCAGAATTACTTGATGC
AGAGTTAGATTTTGAGAAAGGAATTCGTTCTGAGTTTCCTCATTATCTTGAACGATTAAGTGAACAAGCTGACTTGTTAC
TGCAACATACTCAGTCTCAGGCCATGGTTGGTTTATATGAATATACGAACCAACTAAAAGATAGCTATGACGTATTGCTT
GATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAGAAAGCACATCAACAATTAATTCAGTTATTTGA
CGCATTAGCTGCGGGTCAACGAGTTAGTATTATTGAGCAACACCAAAATGTTTTGGAAGAGCTAAAACTATATACCCAAC
ATATTCCAAGCCTTAATTCTGAACCATTAGATAATCAGGATGTTGTTGAGTCATTATTTAGTGTTGATGTAGAACAAACA
TCAGATGAATCTCCGGCATCTATCGAAAGTGTATTAACTGATCATGTAGCAATGAGTCAGAGTATGCATTTAGATCGCCA
ATTCATGACTACTGAGCACGTAAATCGTTATTTTGATCCAGAACTGTTAGATATTTTTCTTGAAGAAGCCGATGAGTTGC
TTGAAGGAATGGATACAGATCTTAATATTTGGGTTAATGATCAAGAGAACTTTGCTGCTCTTAATAACCTGATGCGTTAT
TTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATTGCACATGAATTAGAAAGTATTTA
TGAGCGCATCATTCAAAGACAGTTGGTTGCTTCATCTGCTCTTATTGATTTTATCCGTCTGGTTCAAGATGATTTAGCTG
ACCGTCTACAAATAGTACGTGAGCAGCACCTAGATTATGCGGCTTCTCATACTATTCAAGCGCTTAAGAGTGCCGGTAAG
GTATATGAGTCACTTGGCTCTGTTGTTAAAGAGATGCAAGCAGAGTCTGAAACAGATGTTATACCAGAATTAAATGTTGA
AGTATTACAGCAAGAAGCTATAAACGATACTGCGTTAAATCTCGATGAGTTAACTTCTAATTTTGAGCAGATTGTTGAGT
CTAATACTCGACTTGTTGAGCACACAGAATTACAAATTTTTGATGCAGAAGGCTATACAGACAGTATCCAAGATCAGGAT
ATTGATTCTGTTGTCGAGCAGACATTTATGGAGGAAGCGGCCGAACTGTTAGAGATGGCCGATCATCTGTTAAAGCAATG
GTTTGAACAGCGTACCAATCGTAGTATCTTGCTTCAGCTACAAAGAGCAGTGCACAGTTTGAAGGGTGGTTCCCGTATGT
TGGGACTAGAAACTGTGCAAGCAATTGCTTATCAACTTGAGAATGCTTTTGAAAAATTTGCGCTTTATCATTTTAGCTCA
AATATTTATGACAACTTATTAGAGAGTGCGATTGTCTGGCTAAAAGAGGCAATTTTTAAGCAAAATTATCAACATTTCGA
TGGATTACAGCATAGTCTAGAAAATATTCAGTTTATTGAAACGGCAATTCAAATTCCGAGTAAATTGACTAGAACTGATC
TATTTGGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGATGGTACAGAACCACCGCCAATGATAGGTGCATGGGAACAA
ACGCAGCATCTTGAACAAAACAATGAGATGATTCGTGTTTCAGCAGATTTAATCGAGAAAATGATTGATTTGTCTGGTGA
AAATTCGATTAACCGTTCACGAATTGAAATGGATCTCAGTCAATTTGGTCATACGCTCGTGGAAATGGAATTAGCCATTC
AACGACTTGCGGACCAGTTACGTCGAATGGAAGGCGAATTAGAAACCCAGATTATTGCAAAACACGGTATTGAGCACTCT
CGTTATACAGAGTTTGATCCTCTAGAGATGGATCAATACTCTTCATTAAATCAATTATCGAAATCACTTGCCGAATCTGC
ATCAGACTTAGTGGATTTCAAAAATACTTTATCTGAAAAAATCAGAGATACCGAAAGTTTATTGGTACAGCAATCACGTA
TTCAGGCCGAAATCCAAGAAGGGCTAATGCGAACTCGTCTAGTACCATTCTCTCGATTGCTACCTCGTTTACAACGAATT
GTGAGACAGACTTCTACTGCATTGGATCGACCAGCAGAGCTTTTTGTTAATAATACTGAAGGTGAGCTAGACCGAACAAT
GCTAGAGCGTTTGGTTACACCGCTTGAGCACATGCTTCGAAATGCAATTGACCACGGTCTAGAAGATCGTGTGCAACGCG
AACAAGCAAAAAAACCAGAAACTGGACGTATTGAACTAAATATTCACCGTCAAGGTACGGATGTTGTTGTTACATTTAAA
GATGATGGTCGAGGTATTGATATTGAGAAGGTCCGTCAAAAGGCCCTCTTATCTGGTTTAATTAATTCTGAACAAGTCTT
AGAACATCAAGATATTTTGCAGTTGATTTTCCATCCAGGGTTAAGTACAGCCGATCAAGTCACTCAGATTTCAGGTCGTG
GTGTAGGGCTTGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGACATGTGACTGTTGACTCTGTTTATGGGCAAGGA
ACAATCTTTACCATACGTGTTCCAACCACAGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAACAATTTGC
AATTCCGTTAGCTCAAATTGATCGAATTGTTCGAGTTTCACCAACATCATTAGAACAGTATTTTGGAAGTGCACAAGAGT
TCTTTGAATTTGAAAATAAACGCTATCCATTACGCTATTTATCTGAGTTTGTTGGTAATCAGCCGATTCCACGTTTAAGT
GGGATGATGTATTCGCTACCAGTATTAATGATTAAGGCCAATAATGGACAAACAATTGCATTATTGGTTGATCAGCTTAT
TGGTTCACGAGCGCAGATTGTAGTTAAGCCAATCGGGCAGCAGTTCTCTAGTATTGGTGCGATTGCAGGTGCAACTATTT
TAGGTGATGGTCAAGTTTGTCTCATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGACATAAGTCG
CTCAATGAGACTGTCTATAGACAACGCGAGTCTGACGAACGCCGTCTCATTATGATTGTAGATGACTCTGTTACAGTCCG
TAAGGTGACGACTCGTTTACTCGAACGCCAAGGCTATGACGTAGTCACTGCTAAAGATGGTATTGATGCAATTGAGCAGT
TGGAAAATATTAAACCAGATCTGATGTTGCTTGATATTGAAATGCCACGAATGGATGGTTTTGAGGTACTTAACCTCGTA
CGACATCATGATCTACATCAACATATGCCAGTCATTATGATTACATCAAGAACTGGCGAAAAACACCGTGAACGAGCATT
TGCTTTAGGGGTCAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCTTTTTTCACGA
CACGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.178

100

0.796